| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3778 |
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| Symbol | |
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| ID | 6161909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4237229 |
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| End bp | 4238971 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641666551 |
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| Product | 5'-nucleotidase domain-containing protein |
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| Protein accession | YP_001792797 |
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| Protein GI | 171060448 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTCT CCAAACGCGA TTTCCTGCAG GTGCTCGGGG CTGCCGGCGT GGCCGGCATG
GGCCTGGGTC GTTATGCCGA AGCCGACGCT GCCACGGCGC AGCACGGCCT CTACGAGATG
CCGAAGTTCG GCAACGTCAG CTTTCTGCAC ATGACCGACT GCCACGCGCA GCTCAAGCCG
ATCCACTTCC GTGAGCCCAG CGTCAACCTC GGCATCGGCT CGATGCAGGG CCAGCTGCCG
CACCTGGTGG GCGAGCACCT GCTCAAGGTC GCCGGCGCGC GGCCCAACAC CGACCTGTCG
CATGCCTACA CCTTCCTCGA CTTCGAGAAG GCCGCGCGCC GCTACGGCAA GGTCGGCGGT
TTCGCCCACA TGGCCACACT GGTCAAGCAG CTCAAGGCCA GCCGGCCCGG CGCGCTGCTG
CTCGACGGTG GCGACACCTG GCAGGGCTCG GCCACCTCGC TGTGGACCAA CGCGCAGGAC
ATGGTCGACG CCTGCAAGCT GCTCGGCGTC GACGTGATGA CCGGCCACTG GGAGTTCACC
TACGGCATGG AGCGCGTCAA GGAGATCGTC GACAAGGACT TCGCCGGCAA GGTCGACTTC
GTGGCCCAGA ACGTCAAGAC CAACGACTTC GGCGACCCGG TCTTCAAGCC CTACGTGATC
CGCGAGATCA ACGGCGTGCC CTGCGCCATC ATCGGCCAGG CCTTCCCGTA CACGCCGATC
GCCAACCCGC GCTACATGGT GGCCGACTGG AGCTTCGGCA TCCAGGACGA GAACATGCAG
GCGATGGTCG ACGAGGCGCG TGGCAAGGGC GCGCAGGTGG TCGTCGTGCT CTCGCACAAC
GGCATGGACG TCGACCTGAA GATGGCCAGC CGCGTGCGCG GCATCGACGC GATCTTCGGC
GGCCACACGC ACGACGGCGT GCCGGTGGCG ATCCCCGTCG CCAACGCGGG CGGCAAGACG
CTGGTGACCA ACGCCGGCAG CAACAGCAAG TTCCTCGGCG TGATGGACTT CGACGTCAAG
GGTGGCAAGG TCGTGGACTT CCGCTACCGC CTGCTGCCGA TCTTCGCCAA CCAGCTCAAG
GCCGACCCGG AGATGGACGC ACTCATCACC AAGGTGCGCG CGCCCTACGA AGCCAAGCTG
GCCGAGAAGC TCGCCGTCAC CGACGGCATG CTCTATCGCC GCGGCAACTT CAACGGCTCG
TGGGACCAGC TGATCTGCGA CGCGCTGATG GACGTGCAGG GCGCCGAGAT CGCGTTCTCG
CCGGGCTTCC GCTGGGGCAC CAGCCTGCTG TCGGGCGATG TCATCACGCG CGAGCTGATG
ATGGACCAGC TCGCCATCAC CTACCCCTAC GCCACGGTCT CGCAGATGAG CGGCGAGATG
CTCAAGACCA TCCTCGAGGA CGTCGCCGAC AACCTCTTCA ACCCCGATCC GTACTACCAG
CAGGGCGGCG ACATGGTGCG CGTGGGCGGC CTGCAATACA CCTGCACGCC GGGCGCGAAG
ATGGGCAGCC GCATCAGCGA CATGCGCGTC AAGGGCCGCG CCATCGAGGC CGGCAAGAGC
TACACCGTGG CGGGCTGGGC GCCGGTGGCC GAAGAGGCCT CCAAGGCCGG CAACAAGCCG
GTGTGGGACG TGGTCGAAAC CTGGCTCAAG GGGCAGGGCG GGCATGTCAA GGCGCGCAAG
ATCAACACGC CCAAGCTGAT CGGCGTGGCC GGCAACCCGG GCATGGCGGC TGCAGGCGGT
TAA
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| Protein sequence | MNLSKRDFLQ VLGAAGVAGM GLGRYAEADA ATAQHGLYEM PKFGNVSFLH MTDCHAQLKP
IHFREPSVNL GIGSMQGQLP HLVGEHLLKV AGARPNTDLS HAYTFLDFEK AARRYGKVGG
FAHMATLVKQ LKASRPGALL LDGGDTWQGS ATSLWTNAQD MVDACKLLGV DVMTGHWEFT
YGMERVKEIV DKDFAGKVDF VAQNVKTNDF GDPVFKPYVI REINGVPCAI IGQAFPYTPI
ANPRYMVADW SFGIQDENMQ AMVDEARGKG AQVVVVLSHN GMDVDLKMAS RVRGIDAIFG
GHTHDGVPVA IPVANAGGKT LVTNAGSNSK FLGVMDFDVK GGKVVDFRYR LLPIFANQLK
ADPEMDALIT KVRAPYEAKL AEKLAVTDGM LYRRGNFNGS WDQLICDALM DVQGAEIAFS
PGFRWGTSLL SGDVITRELM MDQLAITYPY ATVSQMSGEM LKTILEDVAD NLFNPDPYYQ
QGGDMVRVGG LQYTCTPGAK MGSRISDMRV KGRAIEAGKS YTVAGWAPVA EEASKAGNKP
VWDVVETWLK GQGGHVKARK INTPKLIGVA GNPGMAAAGG
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