| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3774 |
|---|
| Symbol | |
|---|
| ID | 6162284 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | + |
|---|
| Start bp | 4233888 |
|---|
| End bp | 4235012 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641666547 |
|---|
| Product | protein of unknown function DUF395 YeeE/YedE |
|---|
| Protein accession | YP_001792793 |
|---|
| Protein GI | 171060444 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 64 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACATCG AGGGGTTGTT TGCCCAGTGG GGCGAGATGG GATCCGTCAC CGCCCTCGGT
GCTGCCATCG GCCTGCTGTT CGGCTTCTTC GCGCACCGCT CGCGTTTCTG CCTGCGCTCG
GCCGTGATCG AGTTCGCCCG CCACACCCGC GAAGGCAAGC TGACGGTCTG GCTCTTCACC
TTCTCGACCG CGGTGCTGCT CACGCAGCTG TTCGTGGTGC TCGGCTGGCT CGATGTCAGC
GGAGCCCGCC AGCTGTCGGC CCGCGGCAGC CTGTCCGGCG CCGCCATCGG TGGCGCGATG
TTCGGCACCG GCATGATCCT GGCGCGAGGC TGTTCGAGCC GCCTGATGGT GCTGGCCGCG
CAGGGCAATC TGCGCGCGCT GCTGTCGGGT CTGGTGTTCG CCGTCACGGC GCAGGCGGCG
CTGACCGGCG TGCTCTCACC CGTGCGGCTG GCGATGGCCA GCTGGTGGAC GGTCGAGGGC
GGCGCCTCGC GCGACATCCT CGCCCTCACC GGCATCGGCC ACACCGGCGG CATCGTGTTT
GCCGCGATCT GGCTGGCCGC GGCGCTGGTC TGGGCGCGCC GCCAGCATGT GCGCTTCTGG
GGCTGGTTCG GCGCCATCGG CGTGGGCGTG ATGGTGGCGC TGGCCTGGTT GATGACCTAT
CTGTTCTCGC GCGCCGCCTT CGATCTGGTG GTGCCGATCC AGAGCCTGTC GTTCACCGGC
CCGGCCGCCG ACACGCTGAT GCTGGTGCTG TCGCCGCCCG GCCAGGCGCT CAAGTTCGAC
CTCGGTCTGG TGCCGGGCGT GTTCCTCGGC GCCTTCATCT CGGCGGCACT CTGGCGCGAG
CTCAAGCTCG AAGGTTTCCA GGGCGGCCAG GCGATGCGGC GCTACATCGC CGGCGCCTTC
CTGATGGGCT TCGGCGGCAT GCTGGCGGGC GGCTGTGCGG TCGGCGCAGG CATCTCCGGC
GCAGCAGTCT TCACGCTGAC CTCGTGGGTC ACGCTGTCGA CGATCTGGGG CGCGGCCATG
CTGACCGACC GGCTGGTCGA CCGCGGCGAC GAAGTCGTGC ACAGCCCGGC CGCGATCGAC
CCGAAGTTCG ATCCGGAACT GAGCGCGAGC TACGCCCGGC CCTGA
|
|---|
| Protein sequence | MNIEGLFAQW GEMGSVTALG AAIGLLFGFF AHRSRFCLRS AVIEFARHTR EGKLTVWLFT
FSTAVLLTQL FVVLGWLDVS GARQLSARGS LSGAAIGGAM FGTGMILARG CSSRLMVLAA
QGNLRALLSG LVFAVTAQAA LTGVLSPVRL AMASWWTVEG GASRDILALT GIGHTGGIVF
AAIWLAAALV WARRQHVRFW GWFGAIGVGV MVALAWLMTY LFSRAAFDLV VPIQSLSFTG
PAADTLMLVL SPPGQALKFD LGLVPGVFLG AFISAALWRE LKLEGFQGGQ AMRRYIAGAF
LMGFGGMLAG GCAVGAGISG AAVFTLTSWV TLSTIWGAAM LTDRLVDRGD EVVHSPAAID
PKFDPELSAS YARP
|
|---|
| |