| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3758 |
|---|
| Symbol | |
|---|
| ID | 6163995 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | - |
|---|
| Start bp | 4215702 |
|---|
| End bp | 4216751 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 641666531 |
|---|
| Product | MerR family transcriptional regulator |
|---|
| Protein accession | YP_001792777 |
|---|
| Protein GI | 171060428 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0789] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.312823 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGATC CAACCTCCGC CGACGAAACC CGGCCGTGTT ACCGCAGCGG CGCGGTGGCC
CGCATGATCC GCATGCCGGT GGCGACGCTG CGCATCTGGG AGCGCCGCTA CCAGGTGGCC
GCGCCGGCCA CCAGCCCGAC CGGCCACCGC CTGTATTCGG CCGCCGACGT GCAGCGGCTG
GCGCTGGTCA AGCAGCTGAC CGAGCTGGGC CATTCGATCG GCTCGATCGC CGGGCTCGAT
GCCGAGGGCC TGCGGCAGGT GGCCGCGACC CACGCCACCA CGCTTGCCGG CGCGCGCACG
CTGCCGGCGG CCGCCCCGGT GCTGCCGTGG CGGGTGGTGG TGGCGGGGGG CGCGCTGCTG
CGCCGGCTGC AGCGGCCCAC GCTGCAGCGC CGGCTCGGCC GCCCGCTCGA CATCGTCGCC
GGCGTCGCTC ACCTCGATGA CCTGGCCGAG CTGGATCTGC CGCCGGCCGG CCCGCGTGTC
GATGTCCTGC TGGTGCACGC CAGCGGCCTG CACGAAGGCG ACCTGGCCGA CCTGCAGGCG
GCGGCTCGGG CGATCGGCGC CGCGCGCCTG GCGGTGTTCT ACGGCTTCGC GTCCGCGGCC
ATCGGCGATG CGTTTGCCGC CGCCGGCGTG GCGCTGCTGC GCGAGCCGCG TGACGATGCC
GCGCTCGGCG CCTGGCTGGG CGGCCTGTGC GGCGAGGCGG CCCAGACGCC GGCCGCGCCC
GCCGAGCCGA TCGACTGCGC CGCGCCGGTC ACCGACCCCC GGCTGGTGGC GCTCGGCCCG
GTGCCCGAGC GCCGCTACAG CGACGCCGAA CTGGCCGACT TTGCCGGCCT GTCGTCGACC
ATCGCCTGCG AATGCCCGCG CCACCTGGCC GAGCTGCTGA TGCAGCTGTC GCACTTCGAG
GCCTACAGCG CGCAGTGCCG CGACCGCAGC CCGGCCGACG CCGTGCTGCA CGCCTATCTG
GGCCAGGTGG CGGGGGCTGC ACGCTCGCTG TTCGAGTCAG CGCTGGAGCG GGTGGCGGTG
ATCGAGGGGC TGGTGCCGCC GTCGGCCTGA
|
|---|
| Protein sequence | MPDPTSADET RPCYRSGAVA RMIRMPVATL RIWERRYQVA APATSPTGHR LYSAADVQRL
ALVKQLTELG HSIGSIAGLD AEGLRQVAAT HATTLAGART LPAAAPVLPW RVVVAGGALL
RRLQRPTLQR RLGRPLDIVA GVAHLDDLAE LDLPPAGPRV DVLLVHASGL HEGDLADLQA
AARAIGAARL AVFYGFASAA IGDAFAAAGV ALLREPRDDA ALGAWLGGLC GEAAQTPAAP
AEPIDCAAPV TDPRLVALGP VPERRYSDAE LADFAGLSST IACECPRHLA ELLMQLSHFE
AYSAQCRDRS PADAVLHAYL GQVAGAARSL FESALERVAV IEGLVPPSA
|
|---|
| |