| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3694 |
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| Symbol | |
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| ID | 6161092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4129236 |
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| End bp | 4130495 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641666467 |
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| Product | nucleoside recognition domain-containing protein |
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| Protein accession | YP_001792713 |
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| Protein GI | 171060364 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2715] Uncharacterized membrane protein, required for spore maturation in B.subtilis. |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGCGG CCATGATTCT CAACGTCGTC TGGATCGGTT TCATCCTCGT CGGCTTCGCC
GTCGCCCTGG CCAAGCTGGC ACTGGGCGAT CTCACGGTGT TCGCGCGGGT CATGACCGGC
ATCTTCGACA CCGCCCGCAC CGGTTTCGAC ATCTCGCTGG GCCTGGTCGG CGTGATGAGC
CTGTGGCTGG GCATCATGAA GATCGGCGAG CAGGCCGGCG TGATCGGGCT GTTCGCGCGC
GCGGTGGCGC CGTTCTTCCG GCGGCTGTTC CCCGACATCC CCGCCGGCCA CCCGGCCGGC
GGCAGCATCG TGATGAACTT CAGCGCCAAC ATGCTGGGGC TGGACAACGC CGCCACGCCG
CTGGGCCTCA AAGCCATGCG CGAGCTGCAG GAGATCAACC CGGACAAGAC CACCGCGAGC
AATCCGATGA TCATGTTCCT GGTGCTCAAC ACCGCCGGCA TCACGCTGAT CCCGAGCTCG
GTGATCGCGA TCCGGCAGAG CATCGCGGTC GAGCAGGGGC TGGTCGGCTT CAATGCGGCC
GACATCTTCT TGCCCACGCT GATCGGCACC TTCATCTCGT TTGCTGCCGG GCTGCTGGCG
GTGGCGGCGT ATCAGCGCAT CAACCTGCTG AGCGCGCCGG TGCTGCTGTT CTTCGGCGGC
TTCATCGCCG CGATGGCCGG GCTCTACGGC GCGCTGCACA GCTACCCGCC CGATCAGATG
GCGCAGATCA CCGGCCTGCT CGGCAGCGGC GTGATCTTCT CGGTCATCGT GCTGTTCGTG
GCGGTGGGCG CGCTGCGGCG CATCAACGTC TACGAGGCCT TCGTCGAGGG CGCGAAGGAC
GGCTTCGGCG TGGCGATCCA GATCGTGCCG TACCTGATCG CGATCCTGGT GGCGATCTCG
GTGTTCCGCA GCACCGGCTG CATGGACTAC GTCGTGGGCG CGATCGGCGC GGCGGTCGGC
GCCGTGGGGC TGGACACCGA CTTCGTGCCC GCGCTGCCGG TCGGCCTGAT GAAGACGCTG
TCGGGCAGCG GCGCGCGCGG GCTGATGATC GACGTGATGA AGACCTACGG CGTCGACTCC
TTTGAGGGCA AGCTCGCCGC CATCATCCAG GGCTCGACCG AGACCACCTT CTACGTGCTG
GCGGTCTACT TCGGCAGCGT CAACATCCGC CGCACCCGCT ACGCGCTGAC CTGCGGGCTG
ATCGCCGATG CGGTCGGCGT GGTCGGCGCG ATCTGGGTCG GCTATCTTTT CTACCGTTGA
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| Protein sequence | MLAAMILNVV WIGFILVGFA VALAKLALGD LTVFARVMTG IFDTARTGFD ISLGLVGVMS
LWLGIMKIGE QAGVIGLFAR AVAPFFRRLF PDIPAGHPAG GSIVMNFSAN MLGLDNAATP
LGLKAMRELQ EINPDKTTAS NPMIMFLVLN TAGITLIPSS VIAIRQSIAV EQGLVGFNAA
DIFLPTLIGT FISFAAGLLA VAAYQRINLL SAPVLLFFGG FIAAMAGLYG ALHSYPPDQM
AQITGLLGSG VIFSVIVLFV AVGALRRINV YEAFVEGAKD GFGVAIQIVP YLIAILVAIS
VFRSTGCMDY VVGAIGAAVG AVGLDTDFVP ALPVGLMKTL SGSGARGLMI DVMKTYGVDS
FEGKLAAIIQ GSTETTFYVL AVYFGSVNIR RTRYALTCGL IADAVGVVGA IWVGYLFYR
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