| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3690 |
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| Symbol | |
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| ID | 6161088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4126059 |
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| End bp | 4126808 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641666463 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001792709 |
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| Protein GI | 171060360 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGATC ACGCGATCGA GTTCGAGAAC GTGCTCGCCG GCTACGGCGA TTTCATGATC
CTCAACAACC TCTCGTTCAA GGCCAAACGC GGCGCGATCA CGCTGCTGCT CGGCCCCAAC
GGCGCGGGCA AGTCGACGGT GCTCAAGACG CTGTTCGGCC TGCTGAAGGT GCGCGCGGGC
CGCATCAGGC TCGACGGCCA GGACATCACC GGCTCGAGCG CCAAGGATCT GCTGGTGCAG
CACGGCATCG CCTTCGTGCC GCAGGGCCGC AACCTGTTCG GCCAGCTGAG CGTCTACGAG
AACCTGGAGC TGGGCGGCAT CACGCTGGGC ATGAAGACCA CGCGCGAGCG CATCCCCGAA
GTGCTGGCGC GTTTTCCGCG CGTCAAGGAG CGCATGCACA GCCAGGCCGC CGCGCTGTCG
GGCGGCGAGC AGAAGCAGCT CGAGGTCGGC CGCGCGCTGC TGCTGCGGCC CAAGGTGCTG
CTGATCGATG AGCCGTCGAT CGGCCTGTCG CCGCTGGTGG TGGCCGACGT CTTCAAGCTG
CTGCGCCAGC TGGCCGATCA AGGCACGACC GTGCTGATGG TCGAGCAGAA CGTCAAGAGC
GCGCTGAAGA TCTCCGACGA GGCGATCGCG CTGGAGTCGG GCCGGCGCGT GCTGCAGAAG
TCGGCCGACG AGCTGCTCAA CGACCCGAAC ATCGAGCGGC TGTTCCTGGG TGGCGCGCAC
GCGGCCGCGC CGGCGGCGGC CAAGGCCTGA
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| Protein sequence | MSDHAIEFEN VLAGYGDFMI LNNLSFKAKR GAITLLLGPN GAGKSTVLKT LFGLLKVRAG
RIRLDGQDIT GSSAKDLLVQ HGIAFVPQGR NLFGQLSVYE NLELGGITLG MKTTRERIPE
VLARFPRVKE RMHSQAAALS GGEQKQLEVG RALLLRPKVL LIDEPSIGLS PLVVADVFKL
LRQLADQGTT VLMVEQNVKS ALKISDEAIA LESGRRVLQK SADELLNDPN IERLFLGGAH
AAAPAAAKA
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