| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3687 |
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| Symbol | |
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| ID | 6160460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4123413 |
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| End bp | 4124288 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641666460 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001792706 |
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| Protein GI | 171060357 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATT TCCTGCAGCT GCTGTTCTCC GGTGTCGCCA CCGGCAGCAT CTACGCGCTG
GCCGCACTGG GCTTCACTCT GCTGTGGCAA GCCAGCGGCA CCATCAACTT CGCCCAGGGC
GAGTTCGTGA TGCTGCCCGC CTTCATCATG CTGGGCTTCG CCGCGATGGG CCTGCCGCTG
CTGGCCGCCT TTGCCGCGAC CTGCTTCGTG TCGGTGTTCG TGCTCGGCTG GGCCTTCAAG
CGCGGCATCG CCGACCCGCT GCTCAAGTTC GGCCTGATGC CGATCGTGGT GGCCACCATC
GGCCTGGCGA TCGCGATGCG CAACGGCATC CGCGCCGGCT ACAGCGCCGA GGCCCACCCG
TTCCCGAGCC TGTTCGCCGA CAAGCTGTTC AACATCGGTG GCGTCACGAT CACGCTGGCC
GACGTCGGCA CGCTGGCCTT CGCGCTGCTG CTGGTGCTGG CCACGCAGGC CTTCCTGAAC
AAGACCGTCA CCGGCCGCGC GATGCAGGCC GTGGCGCAGA ACACCGAGAG CGCCACGGTG
CTGGGCATCA ACGTGCCGCG CATGGTGTTC TACACCTTCG CGATCAACGC GCTGCTGGCC
TGCGCGGCCG CGCTGCTGGT CACGCCGACG TACCTGGCCA AGTTCGACAT GGGCGAGGGC
CTGGGCAACA AGGCCTTCTT CGCCGCCATC ATCGGCGGCT TCAACAACAG CCGCGGCGCG
CTGCTGGGTG GCGTCATCGT CGGCGTGGCC GAGAACCTGG CCGCAGCCTA CATCTCGCCG
GCCTACAAGG ACGCGGTGGC GCTGGTGCTG TTCATGGTCG TGATCCTGTT CAAGCCGCAA
GGTTTGCTGG GAACCAAAGA GATGCGGAAA GTCTGA
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| Protein sequence | MTDFLQLLFS GVATGSIYAL AALGFTLLWQ ASGTINFAQG EFVMLPAFIM LGFAAMGLPL
LAAFAATCFV SVFVLGWAFK RGIADPLLKF GLMPIVVATI GLAIAMRNGI RAGYSAEAHP
FPSLFADKLF NIGGVTITLA DVGTLAFALL LVLATQAFLN KTVTGRAMQA VAQNTESATV
LGINVPRMVF YTFAINALLA CAAALLVTPT YLAKFDMGEG LGNKAFFAAI IGGFNNSRGA
LLGGVIVGVA ENLAAAYISP AYKDAVALVL FMVVILFKPQ GLLGTKEMRK V
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