| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3684 |
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| Symbol | |
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| ID | 6160457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4120278 |
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| End bp | 4121042 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641666457 |
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| Product | IclR family transcriptional regulator |
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| Protein accession | YP_001792703 |
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| Protein GI | 171060354 |
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| COG category | [K] Transcription |
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| COG ID | [COG1414] Transcriptional regulator |
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| TIGRFAM ID | [TIGR02431] beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACGC CGATCGACCG CAAAGACATC ATCGAAGGCC TCGGCAAGGG CCTGCGCGTG
ATCGAGTCCT TCGACGACGA CCACCCGCGC CTGAGCCCGA GCGAGGCCGC CGAGCGGGCC
GGCCTGACCC GCACCGCGGC GCGCCGCTAC CTGCTGAGCC TGGTGCATTA CGGCTATGCC
GACAGCGACG GCAAGCATTT CTGGCTGCTG CCCAAGGTGC TGCGGCTGGG CCAGAGCTAC
CTCGGCGCCG CGCGCCTGCC ACGGCTGGTG CAGCCTTTCA TCCAGCGCCT GTCGCAGTCG
TGCGGCGAGA CCGTCAACTT CAGCGTGCTC GACGGCCACG AGATCGTCTA CCTGGCGCGC
AGCGTCAGCC CGCGGGTGAT CTCGATCGGC TTCCACGCCG GGGCGCGGGT GCCGGCGCAC
GTGGTCACGC CGTCGACCGT GATCCTGGCC ACCTACCCCG ACGAGGCGCT CGACCGCTGG
ATCGCCGACC ACCACTTTGC CGCCTTCGCG CCCAACACCG TGACCGACGC GGCGGTGTTT
CGCGCCGACG TGATCGGCGC GCGCCGGCTC GGGTACTGGG TCACCGAGCA GCAGCTCGAG
ATCGGCCTGC GCGGCATGGC GCTGGCGGTG AAGGACCGCA AGGGCGTCTG CCGCGGCGCC
ATCGGCGCCA CCATGCCGAT GCAGAACCAG AGCCGCGAGG ACACCATCGC CCGCCTGCTG
CCCTTGTTGC AGGAGACCGC GCAGGCGCTG CGGCAGGTGA TTTAG
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| Protein sequence | MDTPIDRKDI IEGLGKGLRV IESFDDDHPR LSPSEAAERA GLTRTAARRY LLSLVHYGYA
DSDGKHFWLL PKVLRLGQSY LGAARLPRLV QPFIQRLSQS CGETVNFSVL DGHEIVYLAR
SVSPRVISIG FHAGARVPAH VVTPSTVILA TYPDEALDRW IADHHFAAFA PNTVTDAAVF
RADVIGARRL GYWVTEQQLE IGLRGMALAV KDRKGVCRGA IGATMPMQNQ SREDTIARLL
PLLQETAQAL RQVI
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