| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3683 |
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| Symbol | |
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| ID | 6160456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4118349 |
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| End bp | 4120100 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641666456 |
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| Product | putative FAD-binding dehydrogenase |
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| Protein accession | YP_001792702 |
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| Protein GI | 171060353 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACACCG ACACGACCCC GTCTCCCGCC CGTTCGATCG TTGCCGATGC GGGCGCGACC
CACGATCTGA TCGTCATCGG CGCCGGGGGC GCGGGCATGG CGGCGGCGCT GTTCGGGGCG
ATCCGCGGGC TCAAGGTGCT GCTGCTCGAG CGCACCGAGT TCGTCGGCGG CACCACCGCG
TTTTCGGCCG GCACGGTGTG GATCCCCAAC ACGCCGCACG CGGTCACGGT GGGCGCGCGC
GACAGCGTGG CGCAGGCCGC CACCTACCTC GACCAGGTCG TGGGCGATCA CGCCGACCGC
CGTCTGCGCG AGGCCTTTCT GCGGCAGGGC CCGCAGGCGC TGGCGACGCT GGAGCGCGAG
TCGCACGTCA AGCTGCGGCC CTACGCGCTG CACCCGGATT ACGAGTCGGA TCTCGACGGT
GCCACGCTGC GTGGCCGGGC GATGGAGCCG TTGCCGTTCG ACGGCCGCCA GCTCGGCGCG
CACTTCGCGC TGCTGCGAGC GCCGATCCCC GAGTTCACCG TGCTCGGCGG CATGATGGTC
GACCGCACCG ACGTCAACCA CCTGCTGGCG ATGACGAAAC GCTGGGCCTC GTTCAAGCAC
GCCGCCCGGC TGGTGCTGCG CCAGGCGCGC GACCGGCTCA CGCACCCGCG TGGCACCCGG
CTGGTGATGG GCAACGCGCT GTGCGCGCGG CTGCTGCAGT CGCTGGTCGA GCGCGGCGTC
GAGATCCGCA CCGAGGCGCA GGTCGAGCGC CTCGTCACCG AGGGCGGGCG TGTCACCGGC
ATCGTCCTGA TGCACAAGGG GCAGCGCCAG GCCCTCCACG CGCGCGCCGG CGTGGTGCTG
GCGTCGGGCG GCTTCAACCG CCACCCGCAA CTGCGCGCGC AGCTGCTGCC CGCAGCCGCC
AACTACACGC CCGGTGCGCC CGGCCACACT GGCGAGGCGA TCACGCTGGC GCTGGGCGCG
GGCGCGCAGA TCGGCGACAG GAACCTGCAG AACGCCTTCT GGGCGCCGGT GTCGGTGCGC
CGGCGGGCCG ACGGCAGCAC GGCGGTGTTT CCGCATTTCG TGCTCGACCG GGCCAAGCCC
GGCACGGTGG TGGTCAATCA GGCGGGGCAG CGTTTCGTCA ACGAATCGAC CTCGTACCAC
CGCTTCGGCG CGGCGATGCT GGCCGAACAC GCGCGCAGCG CCTGCATCCC GGCCTACCTG
ATCGCCGACG CGCGCGCGCT CAAGACCTAC GGCCTGGGCA TGGTGCGCCC CGGCGGCATG
GGCCTGGCCG GCGCGTTGAA GGACGGCTAC GTGGTCAGCG GCCAGACACT CGCCGAACTG
GCCGGCCGGC TCGGCGTGCC GGCCGCCGCG CTGGCGCAGA CCGTGGCGCG CTTCAACCAG
CACGCCGCGC GTGGCGAGGA TCCCGACTTC CAGCGCGGCC GCACCGCCTA CCAGCGCAAC
ATCGGCGACG CCGCGGCCGG CGGCATCAAC CCGAACCTGG GCGCGCTGCA GCAGGCGCCG
TATTACGCGG TCAAGCTCTA CCCGGGCGAC ATCGGCGCCA GCGCCGGCCT CGTGACCGAT
GCGCAGGCCC GCGTGCTGGG CGCCAACCAG CAGCCGATCG ACGGCCTCTA TGCGGTCGGC
AACGACATGA ACTCGATCAT GGGCGGCACC TACCCGGGCC CCGGCATCAC GATCGGGCCG
GCGCTGGTGT TCGCCCACAT CGCCGCCGCC GACGCCGCCG GCCGGCTGGC CGGCGAGGCG
CTGGCGGCCT GA
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| Protein sequence | MHTDTTPSPA RSIVADAGAT HDLIVIGAGG AGMAAALFGA IRGLKVLLLE RTEFVGGTTA
FSAGTVWIPN TPHAVTVGAR DSVAQAATYL DQVVGDHADR RLREAFLRQG PQALATLERE
SHVKLRPYAL HPDYESDLDG ATLRGRAMEP LPFDGRQLGA HFALLRAPIP EFTVLGGMMV
DRTDVNHLLA MTKRWASFKH AARLVLRQAR DRLTHPRGTR LVMGNALCAR LLQSLVERGV
EIRTEAQVER LVTEGGRVTG IVLMHKGQRQ ALHARAGVVL ASGGFNRHPQ LRAQLLPAAA
NYTPGAPGHT GEAITLALGA GAQIGDRNLQ NAFWAPVSVR RRADGSTAVF PHFVLDRAKP
GTVVVNQAGQ RFVNESTSYH RFGAAMLAEH ARSACIPAYL IADARALKTY GLGMVRPGGM
GLAGALKDGY VVSGQTLAEL AGRLGVPAAA LAQTVARFNQ HAARGEDPDF QRGRTAYQRN
IGDAAAGGIN PNLGALQQAP YYAVKLYPGD IGASAGLVTD AQARVLGANQ QPIDGLYAVG
NDMNSIMGGT YPGPGITIGP ALVFAHIAAA DAAGRLAGEA LAA
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