| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3677 |
|---|
| Symbol | |
|---|
| ID | 6160425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | + |
|---|
| Start bp | 4110868 |
|---|
| End bp | 4111692 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641666450 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001792696 |
|---|
| Protein GI | 171060347 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2326] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAAAG GCAACGACAA GGCCGACAAG CGCGTCGGCA ACGGCAAGAA CGGCGCCATG
AGCCGCGCCG ACTACGAGGC CGCGCTCGAG CCGATGCAGC TCGAGCTGAT GCAGGTGGCG
CGCTGGGTCA AGCACACCGG GCAGCGGCTG CTGATCGTGC TCGAGGGGCG CGACACCGCC
GGCAAGACCG GCGTCATCAA CGCCATCGAG CTGGGCCTGA ACCCGCGGCT GTGCCAGGTG
GTGGCGCTCG GCAAGCCCAA TGACGAGGAG CGCAGCCAGT GGTATTTCCA GCGCTACGTG
CCGCACCTGC CGGCGGCCGG GCGCATCACG CTGTTCGACC GCAGCTGGTA CAACCGCGCC
GGCGTCGAGC GGGTGATGGG CTTCTGCACC GAAGCGCAGG CGAAGGCGTT TCTCAGGCAG
GTGCCCGACT TCGAGCGCGC GCTGGTGGAG GACGGCATCC TGCTGTTCAA GTACTGGCTC
ACGGTCGACC AGGCCGAGCA GGAAAAGCGC TTTGCCGAGC GGGTGCAAGA CCCGCGCAAA
CGCTGGAAGC TGTCACCCAT CGACCTGCAG GCGCGCCTCA AGTACCGCGA ATACGGCGCC
GCCCGCGACG CCATGCTCAA GGCCACCCAC ACCGAAGCGG CGCCGTGGAC GCTGGTGGAT
TTCAACGACC AGCGGCGCGG CCGGCTGACG CTGATCCGCC ATCTGCTCGA CCGCCTGCCC
GACGTGGCGG TGCCCGAGGA GGTGCTGGCG TTCGAGCCGC TGCCCGGCCC GCCGGGGCGC
GAGAGCCTGC GCGGTGCCTT CAAGCCGCTG GCCGGCTGGC GCTGA
|
|---|
| Protein sequence | MGKGNDKADK RVGNGKNGAM SRADYEAALE PMQLELMQVA RWVKHTGQRL LIVLEGRDTA
GKTGVINAIE LGLNPRLCQV VALGKPNDEE RSQWYFQRYV PHLPAAGRIT LFDRSWYNRA
GVERVMGFCT EAQAKAFLRQ VPDFERALVE DGILLFKYWL TVDQAEQEKR FAERVQDPRK
RWKLSPIDLQ ARLKYREYGA ARDAMLKATH TEAAPWTLVD FNDQRRGRLT LIRHLLDRLP
DVAVPEEVLA FEPLPGPPGR ESLRGAFKPL AGWR
|
|---|
| |