| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3675 |
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| Symbol | |
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| ID | 6160423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4109413 |
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| End bp | 4110447 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641666448 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_001792694 |
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| Protein GI | 171060345 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATCC GTCATTCCCT GATCGCCGCG GCCGTCGCCG CGGTCTGCGC CACCCCGGCG
ATGGCCCAGC AGGTGGTGCT CAAGGTGCAC CACTTCCTGC CGTCGACCTC GAACGTGCAG
CTCAACCTGA TCCAGCCCTG GTGCGACAAG ATCGCCAAGG AATCGGCCGA CAAGCTCAAG
TGCCAGATCT ACCCGGCCAT GACGCTGGGC GGCACGCCGC CGCAGCTGTT CGACCAGGCC
CGCGACGGCG TGGCCGACAT CGTCTGGACG CTGCCGACCT ACTCGGCCGG CCGCTTCGTC
AAGAGCGAGG TCTTCGAGCT GCCGTTCTTC ACCCGCAGCG CCAAGGGTTC GAGCCAGGCC
TACTGGGCCT ACGTGCAGAA GAACGCGCTC GACGAATACC GCGGCGTCAA GCCGCTGTGG
CTGCACACCA ATGACGGCTC GTCCTTCCAC CTGGCCAACC CCAAGGGCGT GAGCAAGCTC
GAAGACCTCA AGGGCCTGAA GATCCGCGCC GCCACGCGCC TGAACTCGCG CATGCTGGCT
TCGCTGGGCG CCACGCCGGT GCAGATGCCG CTGCCGGCGG TGCCCGAGTC GATCAGCAAG
GGCGTGATCG ACGGCGCGAT GGTGCCGTGG GAAGGCGTGC CGACCGTCAA GCTGCACGAG
ATCGCCAAGA GCCACCTCGA CGTGCCGACC GGCCAGCTGA AGTTCGCCAA CTCGCTGTTC
GCCTTCGTGA TGAACCAGGC CAAGTACAAC AGCCTGGCCC CCGAACTCAA GAAGGTGATC
GACGACAACA GCGGCCCGGC GACCTCGGCC TGGGCCGGCG AGAAGGGCTT CGACAGCGTC
GTCGCCGGCA ACCACAAGAT GTCCGGCGAC CGTGGCAACG CGCTGCTCAA GCTCGACGCC
GCCGAATACC AGCGCTGGGT CAAGGCGAGC GAAAACGTCG ACGACGAGTG GATCAAGGAC
GTCTCGGCCA AGGGCGCCAA CGGCAAGGCG CTGCTGGAAG ACGCCCGCGC GCTGATCAAT
CAGTACGACC GCTGA
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| Protein sequence | MKIRHSLIAA AVAAVCATPA MAQQVVLKVH HFLPSTSNVQ LNLIQPWCDK IAKESADKLK
CQIYPAMTLG GTPPQLFDQA RDGVADIVWT LPTYSAGRFV KSEVFELPFF TRSAKGSSQA
YWAYVQKNAL DEYRGVKPLW LHTNDGSSFH LANPKGVSKL EDLKGLKIRA ATRLNSRMLA
SLGATPVQMP LPAVPESISK GVIDGAMVPW EGVPTVKLHE IAKSHLDVPT GQLKFANSLF
AFVMNQAKYN SLAPELKKVI DDNSGPATSA WAGEKGFDSV VAGNHKMSGD RGNALLKLDA
AEYQRWVKAS ENVDDEWIKD VSAKGANGKA LLEDARALIN QYDR
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