Gene Lcho_3672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3672 
Symbol 
ID6160420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp4106682 
End bp4107320 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content71% 
IMG OID641666445 
Productmaleylacetoacetate isomerase 
Protein accessionYP_001792691 
Protein GI171060342 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID[TIGR01262] maleylacetoacetate isomerase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTGT ACAACTTCTT TCGCAGCGGC ACCTCGCATC GGCTGCGCAT TGCCCTGAAC 
CTCAAGGGCC TGACGACCGA GTACGTCGCG GTCGACCTGC GCACCGAGGC GCACCTGAAG 
GCCGAGTTCA AGGCCATCAA CCCGCAAGGC CTGGTGCCGG CGCTGGCGCT CGACGACGGC 
CGGATGCTGA TCCAGTCGCC GGCCATCATC GAGTGGCTGG AAGAGCGCCA CCCGAGCCCG 
GCGCTGCTGC CCGCCGACCC GGAAGACCGC GCCCGCGTGC GTGCGCTGGC GGCGATCGTC 
GGCTGCGACA TCCACCCGAT CAACAACCGC CGCATCCTCG AGACGCTGCG CAAGCAGTTC 
GGCGCCGACG AGACCACGGT CAACGCCTGG TGCGCGGCCT GGATCGGCGA CGGCTTCGAT 
GCCATCGAGG CGCTGCTGGC GGCCGATGCC AAGCGCGGTG CGTTCTGCTT CGGCGACGCG 
CCGACGCTGG CCGACGTCTA CCTGGTGCCG CAGGTGGAGA GCGCGCGGCG CTTCAAGGTC 
GACCTGACGC GCTGGCCGCT GATCGCGGCG GTGGATGCGG CTTGCGGCCA ACTCGAAGCG 
TTCCGCCGCG CCGCGCCGGC GGCGCAGCCG GACGCCTGA
 
Protein sequence
MKLYNFFRSG TSHRLRIALN LKGLTTEYVA VDLRTEAHLK AEFKAINPQG LVPALALDDG 
RMLIQSPAII EWLEERHPSP ALLPADPEDR ARVRALAAIV GCDIHPINNR RILETLRKQF 
GADETTVNAW CAAWIGDGFD AIEALLAADA KRGAFCFGDA PTLADVYLVP QVESARRFKV 
DLTRWPLIAA VDAACGQLEA FRRAAPAAQP DA