| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3670 |
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| Symbol | |
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| ID | 6160418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4104862 |
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| End bp | 4105917 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641666443 |
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| Product | cupin 2 domain-containing protein |
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| Protein accession | YP_001792689 |
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| Protein GI | 171060340 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3435] Gentisate 1,2-dioxygenase |
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| TIGRFAM ID | [TIGR02272] gentisate 1,2-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGGGG AACACACCAT GCAAGAACTT GGACGCCTCG AAGACCTGCC CGCCGACTAC
GTGCAGGCAC TGCGTGACCT GAACCTCGTG CCGCTGTGGC CGAGCCTGCG CGGCGTGCTG
CCGCCGGGCA AGCCGCGGCC CAACACCCGC GCCACCGCCT GGGCCTACGA ATCGATCAAG
CCGCTGCTGC TGAAAGCCGG CGAACTGACG CCGATCGAGA AGGCCGAGCG CCGCGTGCTG
GTGCTCGCCA ACCCCGGCCA CGGCCTGGAG AAGATGCAGG CCAGCGCCGC GATGTACCTC
GGCATGCAGT TGCTGCTGCC GGGTGAGTGG GCGCCGTCGC ACCGCCACAC GCCCAACGCG
GTGCGCATGA TCGTCGAGGG TGAAGGCGCC TACACCACGG TCGACGGCGA GAAGTGCCCG
ATGTCGCGTG GCGACCTGAT CCTGACACCC ACCGGCCTGT GGCACGAACA CGGCCACGAC
GGCAGCGAGC CGGTGGTCTG GCTCGACGTG CTCGATCTGC CGCTGGTCTA TTACATGGAG
GCCTCGTATC ACATCAACGG CGAGCGCCAG ACCGTCAAGC CCGGCCAGGG TGACCGCGCC
TATGCACGCG GCGGCGTGGC GCCGACGGTG ATGTTCGATC GCTCGGACAA GCGCTACCCG
ATGCTGCGCT ACCCGTGGGT CGACGCACGC GCCGCGCTGG TGTCGCTGGC CGCCGACCGG
CCGGATCTGG ACGCGGTGCA GGTCACCTAC GTCAACCCCG AGACCGGCGC CGACGTCGAG
AACATCCTCG GTTTCTACGC GCTGATGCTG CGCCCGGGCC AGACGCTGCG CCTGCCGGTG
CGCTCGCCGG CGATGGTGTT CCACGTCATC GAAGGTGGTG CCGAGGTGAA GGTCGAAGAC
CAGCGTTTCA CGCTCACCGA GGCCGACACC TGCTGCGCGC CCGGCTACAC CGAGGTGAGC
CTCGTCAACC GCTCGGCCGA CACGCCCACC TTCGTCTTCA TCGCCGACGA ATCGCCGCTG
CACCGCAAGC TCGGCGTGTT CGAGAACCGC GGCTGA
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| Protein sequence | MIGEHTMQEL GRLEDLPADY VQALRDLNLV PLWPSLRGVL PPGKPRPNTR ATAWAYESIK
PLLLKAGELT PIEKAERRVL VLANPGHGLE KMQASAAMYL GMQLLLPGEW APSHRHTPNA
VRMIVEGEGA YTTVDGEKCP MSRGDLILTP TGLWHEHGHD GSEPVVWLDV LDLPLVYYME
ASYHINGERQ TVKPGQGDRA YARGGVAPTV MFDRSDKRYP MLRYPWVDAR AALVSLAADR
PDLDAVQVTY VNPETGADVE NILGFYALML RPGQTLRLPV RSPAMVFHVI EGGAEVKVED
QRFTLTEADT CCAPGYTEVS LVNRSADTPT FVFIADESPL HRKLGVFENR G
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