Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3664 |
Symbol | |
ID | 6160314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 4092419 |
End bp | 4092874 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641666437 |
Product | dehydratase |
Protein accession | YP_001792683 |
Protein GI | 171060334 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2030] Acyl dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTTCG CCGAATTCCA GCCCGGGCAA CAGCTCGAAG CCGGCCCCTA TGACGTCACC GAAACCGAGG TGCTGCAGTT CGCCACCGCC TGGGACCCGC AGTGGTTCCA CACCAACGTC GAGGCCGCGG CTGACGGCCC GTTCGGCGGC CTGATCGCGA GCGGCTGGCA CACCTGCGGC ATCGCGATGC GGCTGGCCGC CGACGCCTTC CTGCGCGGTT CGGAGTCCTA CGCCTCGCCC GGCCTGGGTC ACGTCAAGTG GCCGAACCCG GTGCGCCCCG GCGACCGCCT GACGCTGCGC TGCACCGTGC TGGAGGCGCG CACCTCGCGC AGCCAGCCGC AGCTGGGCAT CCTGCACTGG CGCTGGCAGC TGTTCAACCA GGCGGGCGCC GAGGTGCTCG ACATCGACGC CACCAGCCTG TTCGACCTGG TCCGCAACGC CCATCCGCCG GTCTGA
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Protein sequence | MKFAEFQPGQ QLEAGPYDVT ETEVLQFATA WDPQWFHTNV EAAADGPFGG LIASGWHTCG IAMRLAADAF LRGSESYASP GLGHVKWPNP VRPGDRLTLR CTVLEARTSR SQPQLGILHW RWQLFNQAGA EVLDIDATSL FDLVRNAHPP V
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