| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3655 |
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| Symbol | |
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| ID | 6161737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4080351 |
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| End bp | 4081946 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641666428 |
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| Product | benzoate-CoA ligase family |
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| Protein accession | YP_001792674 |
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| Protein GI | 171060325 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR02262] benzoate-CoA ligase family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCATCG AATCGACCCC CGACCTGCAG GTGCCGCCGC CCGGCGAGCG CTTCAACTTC
GCGCAGCACC TGATCGAATG CAACGCCGCG CGCCCGGACA AGGCCGCGTT CATCGACGAC
CTCGGCACGC TCAGCTACGG CGCGCTCGAA GAACGTGTGC GCCGCGTCGC CGCGGGCCTG
CGCGCGCTGG GGCTGAAACG CGAAGAACGC GTCCTGCTGC TGATGCACGA CTGCAACGAC
TGGCCGGTGA GCTTTCTGGG CGCGATGTAC GCCGGCCTGG TGCCGGTGGC GGTCAACACG
CTGCTGACGG CTGACGATTA CGCCTACATG CTCGAACACT CGCGCGCGCA GGCCGCGCTG
GTGTCGGGCG CGCTGCTGCC GGCGCTGACC GCGGCGATGG TCAAGAGCGA CCACGAGGTG
CAGAAGGTGA TCGTGTCGCG CCCGGTCGCG CCGCTGCATC CGGCCGAGGT CGAGTTCGAG
ACCTTTCTTC AATCGCAGGC GCCGCTCGCC AAGCCGGCCA CCACCGCGCG TGACGACGCC
GGCTTCTGGC TCTATTCGTC GGGATCGACC GGCCGTCCCA AGGGCACGGT GCATTCGCAC
GCCAATCCGT ACTGGACGGC CGAGTTGTAC GGCAAGGGCG TGCTGGCGCT GCGCGAGGAC
GACGTCTGCT TCTCGGCTGC CAAGCTGTTC TTCGCCTACG GACTGGGCAA CGGCTTGAGC
TTCCCGATGA GCGTGGGTGC CACCACCCTC CTGATGGCCG AACGGCCGAC ACCCGACGCC
ACCTTCAAGC GCTGGCTCGG TCAGGTCGGT GGTGCGAAGC CGACGGTGTT CTTCGGCGCG
CCGACCGGTT TCGCCGGCAT GCTGGCCTCG CCCAAGCTGC CGGCGCAATC GGAGGTGGCG
ATGCGCCTGG TGTCTTCCGC CGGCGAGGCC TTGCCGGCCG AGCTGGGCGA GCGCTTCAAG
CGCCATTTCG GCGTCGACAT CGTCGACGGC ATCGGCTCGA CCGAGATGCT GCACATCTTC
CTGAGCAACC GCCCCGAGCG CGTGCGTTAC GGCACCACCG GCTGGCCGGT GCCGGGTTAC
GAGATCGCGC TGCGCGGCGA GGACGGCGGC CCGGTGCCGG ACGGCGAACC GGGCGACCTC
TACATCCACG GCCCGAGCGC GGCCATGATG TACTGGGCTA ACCAGACCAA GACCCGCGAG
ACCTTCCAGG GCGGCTGGAC CAAGAGCGGC GACAAGTACG TGCGCAATGC CGACGGCAGC
TACACCTACT CGGGCCGCAG CGACGACATG CTCAAGGTCA GCGGCATCTA CGTCTCGCCC
TTCGAGGTCG AAGCCACGCT GGTGCAGCAC CCGGCGGTGC TCGAAGCCGC GGTGATCGGC
GTGCCCGATG CCGAGGGCCT GACCAAGACC AAGGCCTTCG TGGTGCTCAA GGACGGTGCC
GAGGCCAGCG AGGACGAGCT CAAGCAGTTC GTCAAGGATC GCCTCGCGCC CTACAAGTAC
CCGCGCGTGA TCGAGTTCCT GCGCGACCTG CCCAAGACCG CCACCGGCAA GATCCAGCGT
TTCAAGCTGC GCGAAAAAGA GGCCACTTCG AAATGA
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| Protein sequence | MSIESTPDLQ VPPPGERFNF AQHLIECNAA RPDKAAFIDD LGTLSYGALE ERVRRVAAGL
RALGLKREER VLLLMHDCND WPVSFLGAMY AGLVPVAVNT LLTADDYAYM LEHSRAQAAL
VSGALLPALT AAMVKSDHEV QKVIVSRPVA PLHPAEVEFE TFLQSQAPLA KPATTARDDA
GFWLYSSGST GRPKGTVHSH ANPYWTAELY GKGVLALRED DVCFSAAKLF FAYGLGNGLS
FPMSVGATTL LMAERPTPDA TFKRWLGQVG GAKPTVFFGA PTGFAGMLAS PKLPAQSEVA
MRLVSSAGEA LPAELGERFK RHFGVDIVDG IGSTEMLHIF LSNRPERVRY GTTGWPVPGY
EIALRGEDGG PVPDGEPGDL YIHGPSAAMM YWANQTKTRE TFQGGWTKSG DKYVRNADGS
YTYSGRSDDM LKVSGIYVSP FEVEATLVQH PAVLEAAVIG VPDAEGLTKT KAFVVLKDGA
EASEDELKQF VKDRLAPYKY PRVIEFLRDL PKTATGKIQR FKLREKEATS K
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