| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3652 |
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| Symbol | |
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| ID | 6162475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4077359 |
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| End bp | 4078240 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641666425 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001792671 |
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| Protein GI | 171060322 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTTAG CCACCTTTCT CATCCAGTGC CTCAACGCGC TGCAGTACGG CCTGCTGCTG
TTCCTGGTCG CCTCGGGGCT GACGCTGATC TTCGGGATCA TGGGCGTCAT CAACCTGGCG
CACGGCAGCT TCTACATGAT CGGCGCCTAC ATGGCGTACG CGCTGGCGCC GGTCGTCGAG
CGCACCTTCG GCGGTGGCTT CTTCGCGGTG CTGGCGATCG GGCTGGTGCT GGCGGTGATC
TTCGGCTACG TGCTGGAGTG GGCCTTCTTC AGCTTTCTCT ACGATCGTGA ACACCTGCAG
CAGGTGCTGA TGACCTACGG CCTGATCCTG GTGTTCGAGG AGTTGCGCAG CCTGCTGGTG
GGCGACGACG TGCACGGCGT GCAGCCGCCG GCGTTTCTCT CGGGCACCTT GCCGCTCGGC
GACATGATGA CCTACCCGGT CTACCGCCTG TTCATCTCGG CGGTCTGCCT GGTGCTGGCG
CTGGGCATGT ACTTCGTGTT CACGCGCACG CGGCTGGGCA TGATGATCCG CGCCGGCAGC
ACCAACCGCG AAATGGTGCA GTCGCTGGGC ATCGACATCA AGTTCTTGTA TCGCGTGGTG
TTCGCGGCCG GCGTGGCGAT CGCGGTGCTG GCCGGCATGG TGGCCGCGCC GGTGTCGTCG
GTCTACCCGG GCATGGGCAG CACGGTGCTG ATCATCTGCT TCGTGGTGGT GGTGATCGGC
GGCATCGGCT CGATCCGCGG CGCGCTGCTG GCGGCGCTGC TGATCGGCGT GGTCGACACC
TTCGGCAAGG TGATCTTTCC GCAGGCGGCG GGTGTGCTGG TCTATGTGCT GATGGCGCTG
ATCCTGCTGT GGAAGCCGGA CGGACTTTTT AAAGCCGGCT AA
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| Protein sequence | MDLATFLIQC LNALQYGLLL FLVASGLTLI FGIMGVINLA HGSFYMIGAY MAYALAPVVE
RTFGGGFFAV LAIGLVLAVI FGYVLEWAFF SFLYDREHLQ QVLMTYGLIL VFEELRSLLV
GDDVHGVQPP AFLSGTLPLG DMMTYPVYRL FISAVCLVLA LGMYFVFTRT RLGMMIRAGS
TNREMVQSLG IDIKFLYRVV FAAGVAIAVL AGMVAAPVSS VYPGMGSTVL IICFVVVVIG
GIGSIRGALL AALLIGVVDT FGKVIFPQAA GVLVYVLMAL ILLWKPDGLF KAG
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