| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3639 |
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| Symbol | |
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| ID | 6163174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4064127 |
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| End bp | 4065077 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641666412 |
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| Product | auxin efflux carrier |
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| Protein accession | YP_001792658 |
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| Protein GI | 171060309 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0679] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCACA TCCTCTCGGT CACGATCCCG ATCTACCTGC TCATCGCGGT GGGTTTCATG
GCCGTGCGCG GCGGGCTGTT CAGCAAGGCC GACATGCGGG TGCTGGGCCG CTTCGTCGTC
AACTTCTGCC TGCCGGCGCT GGTGTTCAAC GCGCTGTCGC AGCGCAGCCT GTCGGAGGTG
GTGCACCCGG CCTACCTGGC CGCCTACGCC GGCGGCACGC TGGTGATGCA GCTGGGCACC
GTCTTCGTGC TGCACCGCTT GCGCGGCAAG GGACTGACGG TGGCGGCGGT GCGCGGGCTG
GGCGTGTCGG CGTCCAACAG CGGCTTCGTC GGCCTGCCGA TCGTCCAGCA GCTGATCGGC
CCGGTGGCCG CCGTGGCGCT GGCGCTCAAC ATGCTGGTCG AGAACCTGAT CGCGATTCCG
CTCGCGCTGG CCCTGGCCGA CAGCGGCCAG CAGCAGCGCA GCCGGATGTG GCCGATGGTG
TCGTCGTCGT TGCGCGGGCT GCTGCGCAAT CCGCTGATCC TGGCGATCCT GGCCGGCCTG
CTGTGCGCGC TGCTGGGCCT GCGCCTGCCC GAGCCGCTGG CGCGCACCGT GCAGCTGGTG
TCCACCGCGT CGAGCCCGCT GGCGCTGTTC CTGATCGGCG GCACGCTGGT CGGGCTGCGG
CTGCACGGCA TGCTGGCCGA GGTGATGCAG CTGGTGCTGA GCAAGCTGCT GCTGATGCCA
CTGGCGGTGT TCGGCATGCT GTGGCTGCTG CCGCCGATCG ACCCGCTGCT GCGCACCGCC
GCCGTGCTGC TGGCGGCGAT GCCGATGTTG AGCGTCTACC CGGTGCTGGC CCAGAAGTAC
GACCAGGAGG AGTTCTGCGC CGCCGCGCTG CTGGCCGCCA CCGTGACCTC GTTCTTCACG
ATCAGCGCGC TGATCTGGGG CCTGGGCGAG CTGGACGGCT GGCTGCCCTG A
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| Protein sequence | MRHILSVTIP IYLLIAVGFM AVRGGLFSKA DMRVLGRFVV NFCLPALVFN ALSQRSLSEV
VHPAYLAAYA GGTLVMQLGT VFVLHRLRGK GLTVAAVRGL GVSASNSGFV GLPIVQQLIG
PVAAVALALN MLVENLIAIP LALALADSGQ QQRSRMWPMV SSSLRGLLRN PLILAILAGL
LCALLGLRLP EPLARTVQLV STASSPLALF LIGGTLVGLR LHGMLAEVMQ LVLSKLLLMP
LAVFGMLWLL PPIDPLLRTA AVLLAAMPML SVYPVLAQKY DQEEFCAAAL LAATVTSFFT
ISALIWGLGE LDGWLP
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