| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3630 |
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| Symbol | |
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| ID | 6163227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4055809 |
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| End bp | 4056819 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641666403 |
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| Product | diacylglycerol kinase catalytic region |
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| Protein accession | YP_001792649 |
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| Protein GI | 171060300 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.491893 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCCA CCTCCCAACC CAGCGGCGTG GTGCTGCTCA ATCCGCATGC CAACGGCGGC
AAGGCGCTGG CGCTGCGCCG CCCGATCGAG GCCTGGCTGG CGCGCAACAG CCCCGGCGTG
TCGCTGCTGG TGCCCGACGG CATCGACCAG GCACTGGCCA CGCTGGCGAT CCTGGCCGCG
CGCAGCCGGG TCGTGCTGGT GGGCGGCGAC GGCACGCTCA ACCGCATGCT GCCGGCGATC
CTGCGCTGCG GCCACCGCAT CGGCCTGGTG CCGGCCGGCA AGCGCAACGA CACCGCCCGC
GCGATCGGCA TCGACACGCT GCAGTGGCCC GAAGCGCTGG CCTACGCACT GCACGCGCCG
ACCGGGCCGG TCGACCTGGG CCAGCTCGAC ACCGAAACCG AGACCCGCCA CTTCATCTCC
GGGCTGAGTG CCGGCTTCGA CGCCCACATC GCGCGGGGCG TGACCGACGC GCCGCTGTGG
CTGCGCGGCG CGCCGCGATA CCTGTGGGCC GGCGCCCAGG CCTGGCCCGG CCTGCATCTG
CGCGAGCTGC GGGTCTGGAT CAACGGCCAG CTCGAACACG ACGGCAACAC GCTGATGGTG
TCGGTGCACA ACACCGCCAG CAGCCACGGC GGCGTACCGG CAGCGCCCGG CGCGCGCATC
AACGATCACC GGCTCGACAC GCTGGTGGTC GGCAGCGTCG GCCGTCTGGG CGTGCTGCCG
CTGATGTGGC GGGTGGCCCG GGGTCGCCAT GTGCGACCGC CGCGGGTCAG CCTGCACGGC
ACGCGCAAGA TGCTGGTCGA CGCCACCGAG CCGATGTCGG TGGTGATCGA CGGCGAGGCA
CTCGCGCCGG TGGCGCGCTT CTCGGTGCAC GTGCTGACGC GTGGACTGCA TCTGGCCGGC
GCCCACATGC TGGGCGAGCA GCTGGCCGAC AGCCACATCG TCAACCCCGC CGTCGTCAGC
ACGATCATCG AGGGCGACGG CCCCTCGACC CTGCCACCCG CCGCCACCTG A
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| Protein sequence | MSATSQPSGV VLLNPHANGG KALALRRPIE AWLARNSPGV SLLVPDGIDQ ALATLAILAA
RSRVVLVGGD GTLNRMLPAI LRCGHRIGLV PAGKRNDTAR AIGIDTLQWP EALAYALHAP
TGPVDLGQLD TETETRHFIS GLSAGFDAHI ARGVTDAPLW LRGAPRYLWA GAQAWPGLHL
RELRVWINGQ LEHDGNTLMV SVHNTASSHG GVPAAPGARI NDHRLDTLVV GSVGRLGVLP
LMWRVARGRH VRPPRVSLHG TRKMLVDATE PMSVVIDGEA LAPVARFSVH VLTRGLHLAG
AHMLGEQLAD SHIVNPAVVS TIIEGDGPST LPPAAT
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