| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3622 |
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| Symbol | |
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| ID | 6163258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4044311 |
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| End bp | 4045507 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641666395 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001792641 |
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| Protein GI | 171060292 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.00095064 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGCCC TCCTCACCCA CCCCGTGCAC TCGCTGCTGC TGCCCGACAC GCCCGGCGGC
CCGAGCGCCC ACCTGTCGCC GGACACGATC GCGGTGGCCC TCGCGGCCGA CGCCGTCACC
CTGCCGCCGC ACCACCTGTC GGTGGTGGTG CCGATGTTCA ACGAGGTCGA CAACGCCGCG
CGCCTGATCG ACAGCGTGCA GGCCGCGCTG CAGCACTACC CGCAGCCCTG GGAGCTGATC
GTGGTCGACG ACGGCAGCCA GGACGGCACC GCCCGGGCGC TGGAGACCCG CGCCCGCCAG
GTCGGCGGCC ATGTGCGGGT GCTGCGGCTG GCGCGCAACT TCAGGCAGAC CGCGGCGATG
CAGGCCGGCA TCGACGCCGC GCGCGGCGAC GTCATCGTGA CGATGGACGG CGACCTGCAG
AACGATCCGC GCGACATCGC CACCCTGGTG GCGCGGCTGC TGCGCGACGA CCTCGACGTG
GTGGCCGGCT GGCGCCAGCA GCGCCAGGAC GGCTGGCTGC TGCGCCGGCT GCCGTCGATG
CTGGCGAACC GGCTGATCCG CCGCATCACC GGGCTGCCGT TCCAGGACCT GGGCTGCAGC
CTGAAGGCGT TCCGCGCCGA GGTGCTGCGC GAGGTGCGGC TGTACGGCGA GATGCACCGC
TTCATCCCGG CCTGGCTGGC CACGGTGACC TCGCCGTCGC GCATGGCCGA GGAGCCGGTG
CGCCACCACG CGCGCCAGAA CGGCACGTCG AAATACGGCC TGTCGCGCAC GCTGCGGGTG
CTGGTCGACC TGCTGGCGGT GAGCTTCTTC CAGCGTTTCG CAGCGCGGCC GGGGCATTTC
TTCGGTGTCA TCGGGCTGCT GGTGGTGATG GCCAGCCTGG CGGTGCTCGG CTACCTCGGC
GTGCTCAAGC TGATGGGCGA GCCGATCGGC ACCCGGCCGC TGCTGTCGCT GGGTTTCTTC
GGCCTGATGG GCGGGCTGCA GTTCCTGACC ACCGGCGTGC TGGCCGAACT GCTGATCCGC
ATCTACTACG GCGCCCGCCA TGCCGCGCCG TATGTGGTGA AGGCCGCGGC ACTGGCACCC
GCGGCGGCCC CGACCCGTCC GGCCGTCACG CCCGACGAAG CGGCCGAACT CGTGGCGCCG
CCCTGGGGCG GGCCGCCAGC GCCGGCCCGG GATCCGGCCC GAGCGGTGTC GGCATGA
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| Protein sequence | MSALLTHPVH SLLLPDTPGG PSAHLSPDTI AVALAADAVT LPPHHLSVVV PMFNEVDNAA
RLIDSVQAAL QHYPQPWELI VVDDGSQDGT ARALETRARQ VGGHVRVLRL ARNFRQTAAM
QAGIDAARGD VIVTMDGDLQ NDPRDIATLV ARLLRDDLDV VAGWRQQRQD GWLLRRLPSM
LANRLIRRIT GLPFQDLGCS LKAFRAEVLR EVRLYGEMHR FIPAWLATVT SPSRMAEEPV
RHHARQNGTS KYGLSRTLRV LVDLLAVSFF QRFAARPGHF FGVIGLLVVM ASLAVLGYLG
VLKLMGEPIG TRPLLSLGFF GLMGGLQFLT TGVLAELLIR IYYGARHAAP YVVKAAALAP
AAAPTRPAVT PDEAAELVAP PWGGPPAPAR DPARAVSA
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