Gene Lcho_3610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3610 
Symbol 
ID6161771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp4031614 
End bp4033110 
Gene Length1497 bp 
Protein Length498 aa 
Translation table11 
GC content73% 
IMG OID641666383 
Productadenylate cyclase 
Protein accessionYP_001792629 
Protein GI171060280 
COG category[S] Function unknown 
COG ID[COG3025] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0101894 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGAAA TCGAGTTGAA GTTCCAGATC CCCGCCACGA GCGCGCAGGC CGTGCAGCGG 
GCGGTGGCCA CATCCACGGC GCAGATCACG CACCTGCGGG CGCAGTACTT CGACACCCCC
GATCGCCGCC TCGCAGCCGC CGGCATGGCC TTGCGGCTGC GGCAGGAGGA CGAGCGCTGG
GTGCAGACGC TCAAGGGCCG CGGCGACGGC CACCTGCATC GGCTCGAACA CGAGGTGGTG
ATCGAGACGG CGGGTGGCGA GCCGGTGCTC GACATCACCC GCCACGCCGG CACGCCCGCG
GGCGCCGCGC TCGCGGCCAC GCTGGCTGGC GACGGCGACG CGCTGCGCGT GATGTTCGAG
ACCGACGTGC AGCGCACCCA CCGCATGATC CGCAGCGGCA GCGCCCGCAT CGAGCTGGCG
CTCGACATCG GCGAGATCCG CTCGGGCGCG GCGCGGCTGC CGCTGCACGA GATCGAGTTC
GAGCTCAAGC AGGGCCCGCT CGCCGGCCTG ATCGCGCTGT CGTCGCGCTG GGTCGAGCGC
CACGCGCTGT GGCTCGACGT GCGCAGCAAG GCCGAACGCG GCGACCTGCT CGCGCGCAGC
GTGAAAGTGA ATGCTGCCAC GCTGGCCGAG CAGCCCACGC TGCGGGCCGA CATGAGCGCC
GACGCCGCGC TGCGCGCGAT GGTCGGCGCC TGCCTCGCGC AGATCCTGCC CAATGTGGCG
AACCTGGCCG GCGGCGTTGG CGAGGCCGAG CACCTGCATC AGGCGCGCGT GGGCCTGCGG
CGCCTGCGCA GCGCGCTGCG GGTGTTCGGT GAAGGTTCGG ACGATGTCGA CGCGACCTGG
CAGCCCGCGC TGGCCGAACT CTTCGCGCAT CTGGGCAGCG CGCGCGACCG GGACGTGCTG
GCCGACACCT GGCTGCCTGC GCTGCGTGCG GCGGGTGCGC CGGACTTGTT CGACGGTTCG
GCCACGGCTG ACGAAACCGA CGGCATTGAC ACGGTCGGCG AGGCGCTGCG CGCACCGGCC
TGCGGCCTGT TGCTGCTCGA TCTGATGGCC TTTGCGCACG GTGCGGCGCA GACCGCCGAG
GCCGCGGATC AGCCGTCGGA CCTGTCGCTG ACCGAGCGCG TCCGCCCGCT CGTCGAGCGC
CTGCATCGAC AGCTCGGCAA AGATGCCACC GAGTTCCTGA CCTGCGACGA CGCTCGCCGC
CACCGCACCC GCAAGCGCCT GAAGCGGCTG CGTTATGCGG TCGAGCTGGT GTCGTCGGTG
TGCCGCGGCA AGGCCGTCAA GCGCTACCTC GCGCGGCTGC GGCCGGCCCA GGATGCGCTC
GGCCTGTACA ACGACCTGAC GGTGGCCGAG GCGCTGTTCA AGCGCCGCCT CGAACACGAT
CCGCGCGCCT GGTTCGCGCT CGGCTGGCTG GCCGCGCAGC GCCAGAAGCT GCTGGCCGAC
GCGGCCCAGG CACTGGCCGA ACTGCCGCGT TCAGCGCGGA TCTGGCGCCG CGACTGA
 
Protein sequence
MVEIELKFQI PATSAQAVQR AVATSTAQIT HLRAQYFDTP DRRLAAAGMA LRLRQEDERW 
VQTLKGRGDG HLHRLEHEVV IETAGGEPVL DITRHAGTPA GAALAATLAG DGDALRVMFE
TDVQRTHRMI RSGSARIELA LDIGEIRSGA ARLPLHEIEF ELKQGPLAGL IALSSRWVER
HALWLDVRSK AERGDLLARS VKVNAATLAE QPTLRADMSA DAALRAMVGA CLAQILPNVA
NLAGGVGEAE HLHQARVGLR RLRSALRVFG EGSDDVDATW QPALAELFAH LGSARDRDVL
ADTWLPALRA AGAPDLFDGS ATADETDGID TVGEALRAPA CGLLLLDLMA FAHGAAQTAE
AADQPSDLSL TERVRPLVER LHRQLGKDAT EFLTCDDARR HRTRKRLKRL RYAVELVSSV
CRGKAVKRYL ARLRPAQDAL GLYNDLTVAE ALFKRRLEHD PRAWFALGWL AAQRQKLLAD
AAQALAELPR SARIWRRD