Gene Lcho_3602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3602 
Symbol 
ID6161836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp4021969 
End bp4022556 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content74% 
IMG OID641666375 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001792621 
Protein GI171060272 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1246] N-acetylglutamate synthase and related acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.23036 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAGC GCAGTCAGAC GGCCATCGAC AAGGCCATCA ACACGGCCCG GGGGGCCATG 
AAGGTGATGC GTGCGCTGTC GCCGCAGGCG GCCGCCCGGG GCCGTGACGG CCCAGCCGAC 
AGCCGCTCGC TGCAGCTGCG CCAGGCCGGC GAGTTCGACC TGCCGCGCCT GCTGCAGCTG 
CTGATCGACG CCGGGGTCGA CCAGGCCGAC GAGGGCGATC CAGCGGCTGC CATCGAGTCC 
CTGCGCCGCA TCCACGGCGC GGGCGGCGAG GTCTGGCTGG CCGAGGAAGA CGGCCGCCTG 
CTCGGCAGCC TGACGTTCTA CCTGCTGCCG CTGCTGGCCC ACCGCGGCAC GCCGATCGCG 
CTGGTCGAGG AGGTCGTGAT CCACCCCGCC GCCCGCCGCC ACGGCATCGG CCGCGCCCTG 
ATGAACCACG CCACGGCGCG GGCGCGCGCC CGCGGGGCCA GCAAGCTGGC GCTGTCGTCC 
GGCCACGCGC GCTCAGGGGC GCAGTCGTTC TTCGATCACC TGGGTTATGC CCGGCACGGC 
AACAGCCCGC TGCTGCCGCC GGGCACGCCC GAACACAGCG CCGGCTGA
 
Protein sequence
MNKRSQTAID KAINTARGAM KVMRALSPQA AARGRDGPAD SRSLQLRQAG EFDLPRLLQL 
LIDAGVDQAD EGDPAAAIES LRRIHGAGGE VWLAEEDGRL LGSLTFYLLP LLAHRGTPIA 
LVEEVVIHPA ARRHGIGRAL MNHATARARA RGASKLALSS GHARSGAQSF FDHLGYARHG 
NSPLLPPGTP EHSAG