| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3590 |
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| Symbol | |
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| ID | 6162760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 4007704 |
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| End bp | 4009347 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641666363 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001792609 |
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| Protein GI | 171060260 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCGGA TCCATCCGTA CGACGTCGGC CTGGAGCGCA ATCCGGCCAA CTTCGTCGCA
CTTTCACCCC TGAGCTTCAT CGAGCGCGCC GCAGCGGTCT ATCCGCAACG CGTTGCCGTG
ATCCATGGCG AGCTGCGCCA GACCTGGGCG CAGACCTTCG AACGCTGCCG CCGCCTGGCC
AGCGCGCTGC GGCAGGCGGG CGTCGGCCGG GGCGACACCG TGGCGGCCAT GCTGCCCAAT
GTGCCGGCGA TGTTCGAGGC CCATTTCGGC GTGCCCGCCA CCGGCGCGGT GCTCAACACG
CTCAACACCC GGCTCGACGC CGAGGCCATC GCCTTCATGC TGCAGCACGG CGAGGCCAAG
GTGCTGCTCA CCGACCGCGA ATTTGCCGGC GTGATCGAGC CGGCGCTGGC GCTGCTGGGC
GAACACCGCC CGCTGGTGAT CGAGGTCGAG GACGAACTGG CCCCGGCCGG CAAGGCGCTG
GGCGAGATCG GCTACGAGGC CTTCCTGGCC GGCGGCGACG CGGCCCAGGC CTGGACCCTG
CCCGACGACG AGTGGGACGC GATCGCGCTC AACTACACCT CGGGCACCAC CGGCAACCCC
AAGGGCGTGG TCACCCACCA CCGCGGCGCC TACCTCAACG CCGCCAGCAA CGTGATCGGC
TGGAGCCTGC CGCAGCACCC CACCTATCTG TGGACGCTGC CGATGTTCCA CTGCAACGGC
TGGTGCTTCC CGTGGACGAT GGCGCTGGTG GCCGGCACCA GCGTGTGCCT GCGCCGCGTC
GACCCGGCAC TGATCTACAC GCTGATCCGC GCACACCGGG TCACGCACCT GTGCGGCGCG
CCGATCGTCT ACAGCATGCT GATCCACGCA CCGGCCGCGC TGCGCGAAGG CATCACGCAC
ACCGTCAACG GCCTGATCGC CGGGGCTGCA CCGCCGGCCG CCGTGATCGA AGGCTGCGAG
GCCGCCGGCA TCAACCTGAC CCACGTCTAC GGCCTGACCG AGGTCTACGG CCCGGCGGCG
GTGTGCGCCA AGCAGGAAAG CTGGGATGCG CTGCCACTGG CCGAGCGCGC CATGCTCAAC
AGCCGCCAGG GCGTGCCGTA TCCGCTGCAG CAGGCGGTGG CCGTGCTCGA CCCGGCAACG
ATGCAGCCGG TGCCCGCCGA CGGCGTCACC ATGGGCGAGA TCTTCTTTCG CGGCAATGTC
GTGATGAAGG GCTACCTGAA GAACCCGGAC GCCACCGCCG AAGCCTTTGC CGGCGGCTGG
TTCCACACCG GCGACCTGGC CGTGCTGCAC CCTGACGGCT ACGTCAAGAT CAAGGATCGC
AGCAAGGACA TCATCATCTC CGGCGGCGAG AACATCAGCT CGCTCGAGGT CGAGGACACG
CTGCATCGCC ACCCGGCCGT GATGCTGGCC GCCGTGGTGG CCCAGCCCGA CGCCAAGTGG
GGCGAGGTGC CTTGTGCCTT CATCGAGCTC AAGCCCGGCA TGCAGGTCAG CGAGGCCGAG
CTGATCGACT TCTGCCGCAG CCACCTGGCG CGATTCAAGG TGCCCAAGCG CATCGTCTTT
TCCGAACTGC CCAAGACCTC GACCGGCAAG CTGCAGAAGT TCGTGCTGCG CGGCCAGGCC
CAGTCGGCCA GCGCGATCGA GTGA
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| Protein sequence | MSRIHPYDVG LERNPANFVA LSPLSFIERA AAVYPQRVAV IHGELRQTWA QTFERCRRLA
SALRQAGVGR GDTVAAMLPN VPAMFEAHFG VPATGAVLNT LNTRLDAEAI AFMLQHGEAK
VLLTDREFAG VIEPALALLG EHRPLVIEVE DELAPAGKAL GEIGYEAFLA GGDAAQAWTL
PDDEWDAIAL NYTSGTTGNP KGVVTHHRGA YLNAASNVIG WSLPQHPTYL WTLPMFHCNG
WCFPWTMALV AGTSVCLRRV DPALIYTLIR AHRVTHLCGA PIVYSMLIHA PAALREGITH
TVNGLIAGAA PPAAVIEGCE AAGINLTHVY GLTEVYGPAA VCAKQESWDA LPLAERAMLN
SRQGVPYPLQ QAVAVLDPAT MQPVPADGVT MGEIFFRGNV VMKGYLKNPD ATAEAFAGGW
FHTGDLAVLH PDGYVKIKDR SKDIIISGGE NISSLEVEDT LHRHPAVMLA AVVAQPDAKW
GEVPCAFIEL KPGMQVSEAE LIDFCRSHLA RFKVPKRIVF SELPKTSTGK LQKFVLRGQA
QSASAIE
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