| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3586 |
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| Symbol | |
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| ID | 6162872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4003802 |
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| End bp | 4004689 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641666359 |
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| Product | carboxymethylenebutenolidase |
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| Protein accession | YP_001792605 |
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| Protein GI | 171060256 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0412] Dienelactone hydrolase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGACA CCGGATTGCC GCAAGCCCGC ACTTCGCCAG CCCCTGATTC GGACCGCGGC
AGGCGCGGTT TCCTGCGTGC GGCCCTGGGC AGCGGATTTG CCGCCGCGGT GCTGCCGGTG
GTGGCGCAGA CCGAGATCCG CACCGATGCC GTCGGGCTCG AGGTCGGCGA GGTCACGATC
GACGTCGCCG GCTTCAAGAT GCCGGCCTAC CGCGCCGCGC CGGCCGGCCG CAGCAACCTG
CCGGTGGTGC TGGTGGTGAG CGAGATCTTC GGCGTGCACG AGCACATCGC CGACGTGGCC
CGGCGCTTTG CCAAGCTTGG CTACCTGGCC ATCGCGCCCG AGCTGTTCGT GCGCCAGGGC
GATGCCGGCA GCTACGGCGA GATCGCCAGG CTGATCGCCG AGGTCATCAG CCAGGTGCCC
GACGCGCAGG TGATGGCCGA TCTCGACGCC ACCGTGGCCT GGGCGCGCAC GCACGGCGGC
GACACCTCGC GCCTGGCGAT CACCGGCTTC TGCTGGGGCG GGCGCATCAC CTGGCTGTAC
AGCGCGCACA ACCCGACGGT GAAGGCCGGC GTGGCCTGGT ACGGACGGCT GGTGGGCGCG
CCGAGCGCCT TGACGCCGCG CCATCCGCTC GACCTGGCGG GCGACCTGAA GGCGCCGGTG
CTCGGCCTCT ACGGCGGGCA GGACAGCGGC ATCCCGCTCG ACACGGTCGA CAAGATGAAG
GCCGCCTTGT CGGGCGGGCC GGCCGCGGCG ACGGCGTCAC GCTTCGTGAT CTACCCGGAC
GCGCCGCATG CCTTTCATGC CGACTACCGG CCGAGCTACC GCAAGGATGC GGCCGACGAC
GGCTGGCAGC GCTGCCAGGC CTGGTTGCGC TCGCACGGCG TGGCCTGA
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| Protein sequence | MLDTGLPQAR TSPAPDSDRG RRGFLRAALG SGFAAAVLPV VAQTEIRTDA VGLEVGEVTI
DVAGFKMPAY RAAPAGRSNL PVVLVVSEIF GVHEHIADVA RRFAKLGYLA IAPELFVRQG
DAGSYGEIAR LIAEVISQVP DAQVMADLDA TVAWARTHGG DTSRLAITGF CWGGRITWLY
SAHNPTVKAG VAWYGRLVGA PSALTPRHPL DLAGDLKAPV LGLYGGQDSG IPLDTVDKMK
AALSGGPAAA TASRFVIYPD APHAFHADYR PSYRKDAADD GWQRCQAWLR SHGVA
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