| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3581 |
|---|
| Symbol | |
|---|
| ID | 6162867 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | + |
|---|
| Start bp | 3998123 |
|---|
| End bp | 3999538 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641666354 |
|---|
| Product | glutamine synthetase, type I |
|---|
| Protein accession | YP_001792600 |
|---|
| Protein GI | 171060251 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0174] Glutamine synthetase |
|---|
| TIGRFAM ID | [TIGR00653] glutamine synthetase, type I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAGA CCGTCGCCGA CGTGATGAAC ATGGTGAAGG AAAACGAAGT CAAGTTCGTC
GACTTCCGTT TCACCGACAC CCGCGGCAAG GAACAGCACG TCACCGTGCC TGTTTCCCAT
TTCGATGAAG ACAAGTTCAC GTCGGGTCAC GCCTTCGACG GTTCGTCGAT CGCCGGCTGG
AAGGGCATCG AAGCCTCGGA CATGCAGCTC ATGCCCGACC CGAACACGGC CAACATCGAT
CCGTTCTTCG AAGAGCCGAC GATGATCCTG ACCTGCGACG TGGTCGAGCC CGGTGACGGC
AAGCCCTACG AGCGCGATCC GCGTTCGCTG GCCAAGCGCG CCGAGGCCTA CATGAAGTCC
ACCGGCCTGG GCGACACCGC CTACTTCGGC CCGGAACCCG AGTTCTTCGT CTTCGACAGC
GTGCGCTGGA ACGCCGACAT GTCGGGCTGC TTCGTCTCGA TCGAGTCGGA AGAAGCCGCC
TGGAACACCG GCAAGGACTA CGAGCACGGC AACAAGGGCT TCCGCCCCGC CGTCAAGGGT
GGCTACTTCC CCGTGCCGCC GGTCGACTCG TCGCAAGACA TGCGCTCGGA GATGTGCCTG
ATCCTCGAAT CGCTGGGCAT CCCGGTCGAA GTGCATCACC ACGAAGTGGC GACCGCCGGC
CAGATGGAAC TGGGCACCAA GTTCAGCACG CTGATCCAGC GCGCCGACTG GGTCCAGCTG
CAGAAGTACG TGATCCACAA CGTCGCGGCC GCCTACGGCA AGACCGCCAC GTTCATGCCC
AAGCCGATCG TCGGTGACAA CGGCAGCGGC ATGCACGTGC ACCAGTCGGT CTGGAAGGAC
GGCAAGAACC TGTTCGCCGG TGACGGCTAC GCCGGCCTGT CGGACTTCGC GCTGTACTAC
ATCGGCGGCA TCATCAAGCA CGCCCGTGCG CTCAACGCCA TCACCAACCC CGGCACCAAC
AGCTACAAGC GCCTGGTCCC CGGCTTCGAA GCCCCGGTGA AGCTGGCCTA CTCGGCCAAG
AACCGCTCGG CCTCGATCCG CATCCCGCAC GTCGCCAATC CGAAGGGCCG CCGCGTCGAA
GCGCGTTTCC CGGATCCGCT GATGAACCCG TACCTGGGTT TTGCCGCGCT GCTGATGGCC
GGTCTGGACG GCGTGGAAAA CAAGATCCAT CCGGGCGAGC CCGCCTCGAA GGACCTGTAC
CACCTGCCGC CGGAAGAAGA CGCGAAGATC CCGACCGTGT GCTCGAGCCT GGAACAGGCC
CTCGAGTATC TGGACAAGGG CCGCAGCTTC CTGACCAAGG GTGGCGTGTT CACCGACTCG
TACCTCGATG CCTACATCGA GCTGAAGATG CAGGAAGTCA CGCGCATGCG CATGACCACG
CACCCGATCG AGTTCGACAT GTACTACACG CTGTGA
|
|---|
| Protein sequence | MAKTVADVMN MVKENEVKFV DFRFTDTRGK EQHVTVPVSH FDEDKFTSGH AFDGSSIAGW
KGIEASDMQL MPDPNTANID PFFEEPTMIL TCDVVEPGDG KPYERDPRSL AKRAEAYMKS
TGLGDTAYFG PEPEFFVFDS VRWNADMSGC FVSIESEEAA WNTGKDYEHG NKGFRPAVKG
GYFPVPPVDS SQDMRSEMCL ILESLGIPVE VHHHEVATAG QMELGTKFST LIQRADWVQL
QKYVIHNVAA AYGKTATFMP KPIVGDNGSG MHVHQSVWKD GKNLFAGDGY AGLSDFALYY
IGGIIKHARA LNAITNPGTN SYKRLVPGFE APVKLAYSAK NRSASIRIPH VANPKGRRVE
ARFPDPLMNP YLGFAALLMA GLDGVENKIH PGEPASKDLY HLPPEEDAKI PTVCSSLEQA
LEYLDKGRSF LTKGGVFTDS YLDAYIELKM QEVTRMRMTT HPIEFDMYYT L
|
|---|
| |