| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3574 |
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| Symbol | paaA |
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| ID | 6163144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3990298 |
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| End bp | 3991326 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641666347 |
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| Product | phenylacetate-CoA oxygenase subunit PaaA |
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| Protein accession | YP_001792593 |
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| Protein GI | 171060244 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3396] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02156] phenylacetate-CoA oxygenase, PaaG subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.520035 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACACAC AAGCGATGGA CACGATGGGC AAGGAAGGCG CCGACGCGCC CAAGGCCTTG
CGCTCGGCCG AAGAGATGCA GTTGCAGGCG CGTTTCGACG AACGCATCGA CGCCGGCGAC
TTCATCGAGG CCAAGGACTG GATGCCCGAC AACTACCGCA AGACGCTGAC GCGGCAGATC
AGCCAGCACG CGCACAGCGA GATCGTCGGC ATGCTGCCCG AGGGCAACTG GATCGGCCGC
GCCCCGACGC TCAAGCGCAA GGCGATCCTG CTGGCCAAGG TGCAGGACGA AGGCGGCCAC
GGCCTCTACC TCTACGCCGC CGCCGAGACG CTCGGCCAGA GCCGCGACCA GCTGCTCGAC
GGCCTGCACA GCGGCCGCGC CAAATACAGC TCGATCTTCA ACTACCCGAC GCTGACCTGG
GCCGACATCG GCGTGATCGG CTGGCTGGTC GACGGCGCGG CGATCATGAA CCAGGTGCCG
ATCTGCCGCT GCTCGTACGC GCCGTATGCG CGGGCGATGA TCCGCATCTG CCGCGAAGAA
AGTTTTCATC AGCGCCAGGG TTACGACGCG CTGCTGGTGA TGATGACGAA GGGCACCGAG
GCGCAGAAGG CGATGGTGCA GGACGCCGTC AACCGCTGGT GGTGGCCGTC GATCATGATG
TTCGGCCCGC CCGACGACCA GTCGCCCAAC ACCGCGCAGA GCATGCGCTG GGGCATCAAG
CGGGTCTCGA ACGACGACCT GCGCCAGAAG TTCATCGACG CCACCGTCGA CCAGGCCAAG
GTGCTCGGCA TCACGCTGCC CGACCCGGAC CTGAAGTGGA ACGAGGCCCG CGGCCATTGG
GATTTTGGTG TCATCGACTG GGCCGAGTTC TGGCGCGTGG TGGGCGGCGA CGGCCCCTGC
AACCGTGAAC GCCTGGCCAT GCGCGTGCAG GCCTGGGAAG ACGGCGAATG GGTGCGCGAG
GCCGCATTGG CACACGCCCG CAAGCATTCG CCCGATGCAC CGACCGCGCC GCAACAGCAG
GCGGCCTGA
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| Protein sequence | MYTQAMDTMG KEGADAPKAL RSAEEMQLQA RFDERIDAGD FIEAKDWMPD NYRKTLTRQI
SQHAHSEIVG MLPEGNWIGR APTLKRKAIL LAKVQDEGGH GLYLYAAAET LGQSRDQLLD
GLHSGRAKYS SIFNYPTLTW ADIGVIGWLV DGAAIMNQVP ICRCSYAPYA RAMIRICREE
SFHQRQGYDA LLVMMTKGTE AQKAMVQDAV NRWWWPSIMM FGPPDDQSPN TAQSMRWGIK
RVSNDDLRQK FIDATVDQAK VLGITLPDPD LKWNEARGHW DFGVIDWAEF WRVVGGDGPC
NRERLAMRVQ AWEDGEWVRE AALAHARKHS PDAPTAPQQQ AA
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