Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3569 |
Symbol | |
ID | 6160999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 3987413 |
End bp | 3988501 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641666342 |
Product | phenylacetate-CoA oxygenase/reductase, PaaK subunit |
Protein accession | YP_001792588 |
Protein GI | 171060239 |
COG category | [C] Energy production and conversion |
COG ID | [COG0633] Ferredoxin [COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 |
TIGRFAM ID | [TIGR02160] phenylacetate-CoA oxygenase/reductase, PaaK subunit |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.211581 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATCGG TTCTCTTTCA TTCATTGCGC GTGCGCGCGA TCGAGCCCGA TACCGCCGAA GCGGTGATCG TCACCTTCGA GGTACCGCCC GAACTGCGCG AGACCTTCGG CTTCACGCAG GGCCAGTACC TGACGCTGCG CCACCACGTC GATGGCCAGG ACCTGCGGCG CTCGTATTCG ATCTGCGCCG GTGTCGACGA CGGCGAGCTG CGCGTGGGCG TGCGCAAGGT CAAGGGCGGT GTGTTCTCGA ACTGGATCAA CGCCGAGTTG AAGGTCGGCG ACCGCCTGCA GGTGATGGCG CCGCAGGGCC GTTTCTTCGT ACCGATCGAG CCTGCAGCGC GGCGCCATCA CCTCGGCATT GCCGGCGGCA GTGGCATCAC GCCGATCCTG TCGATCATGA AGACGGTGCT GGCGCGCGAG CCGGCCAGCC GCTTCACGCT GATCTACGGC AACCGCTCGC TGCAGTCGAC GATGTTCAAG GAGGAGATCG AGGACCTCAA GAACCGCTAC CTGACGCGGC TCGTCCTGCA CCACGTCTTT TCGGATGAAC ACACCGATTC GCCGATCAAC GAAGGCCTGA TGAACCGCGA CAAGATCGGC GAGTTCCTGC GCGTGCTGGT GCCGGCGGCG CAGATCGACC ACGCCTACGT CTGCGGTCCG TTCCAGATGA ACGACGAGGC CGAGGCCGCG ATGCTGGCGG CGGGCGTGCC CGAAGAGCGC ATCCACATCG AACGTTTCGG CGTGGCGCAG CCGGCCGGTG CGCCAGTCGG CGCGGTGGTG CACGAGGCGC AGCCGGGCGA CGCCGAGCAG GCGCGTGTCA CCATCATCCG CGACGGCCTC AGCCGCGAGA TCGTGTTCCG CCGCGAGCAG CCGAGCATCC TCGATTGCGC CAGCGCCGCG GGGCTGGAGA TGCCGTTCTC GTGCACCTCG GGTGTCTGCG GCACCTGTCG CGCCAAGCTG CTCGAAGGCC AGGTGCGCAT GGAGCGCAAC TTCGCGCTCG ACAAGGCCGA GGTGGCCGCC GGCTACGTGC TGTGCTGCCA GGCGCACCCG CTGACCGAGC GCGTGGTGCT GAGCTTTGAC GCTCGCTGA
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Protein sequence | MTSVLFHSLR VRAIEPDTAE AVIVTFEVPP ELRETFGFTQ GQYLTLRHHV DGQDLRRSYS ICAGVDDGEL RVGVRKVKGG VFSNWINAEL KVGDRLQVMA PQGRFFVPIE PAARRHHLGI AGGSGITPIL SIMKTVLARE PASRFTLIYG NRSLQSTMFK EEIEDLKNRY LTRLVLHHVF SDEHTDSPIN EGLMNRDKIG EFLRVLVPAA QIDHAYVCGP FQMNDEAEAA MLAAGVPEER IHIERFGVAQ PAGAPVGAVV HEAQPGDAEQ ARVTIIRDGL SREIVFRREQ PSILDCASAA GLEMPFSCTS GVCGTCRAKL LEGQVRMERN FALDKAEVAA GYVLCCQAHP LTERVVLSFD AR
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