| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3562 |
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| Symbol | |
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| ID | 6161056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3981420 |
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| End bp | 3982154 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641666335 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001792581 |
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| Protein GI | 171060232 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.300624 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACGC AGCCCTGCGC GCTGAGCGTG CGTGACCTGA CGCTGGCGCA CCGCGGTCGC
ACCGCGCTGA TCGGCCTGAA CGGGCGTTTC GAGCCCGGTG TCGCCACCGC CGTCATCGGC
CCGAACGGCG CCGGCAAGAG CAGCCTGCTG GCCGCGCTGG CCGGCCAGTT GCGGCCGACC
GCCGGCCAGA TCGAGCGCGA CCCGCGCAGC CGCATCGCCT ATCTGCCGCA GCAGACCGCG
TTCGACCGCA GCTTTCCGGT CTCGGTGCAC GATCTGGTGG CGATGGGCCT GTGGCCGCGG
CTGGGCGCGT GGCGCCGCAT CGACGCCTCG CACCGCGCGC TGATCGACGC CGCGCTGGCG
CAGGTCGGCC TGGCCGATGC GGCCCGGCGG CCGGTCGCCG AGCTGTCGGC CGGGCAGTGG
CAGCGTGCCC TGTTCGCGCG CCTGCTGCTG CAGGACGCCG ACGTGATCCT GCTCGACGAG
CCCTTCAACG CCGTCGACGA GCAGACCACC ACCGACCTGC TGGCGCTGCT GGCGCAGTGG
GTGGCGCAGG GCCGCACCGT CATCGCGGTG CTGCACGACC TGGCGCAGGT GCGCCGCCAT
TTCGACCAGA CCCTGATCCT GTCGGGCCAG CGCTGCCGCG CCTGGGGCCC GACCGCCGAG
GTGCTCGGCA CGGTCGAGCC GTCCGCGGCC GTCGCCTGGC TGAACCCGTC CGCCCCCTGG
CTGCAAGCCG CCTGA
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| Protein sequence | MTTQPCALSV RDLTLAHRGR TALIGLNGRF EPGVATAVIG PNGAGKSSLL AALAGQLRPT
AGQIERDPRS RIAYLPQQTA FDRSFPVSVH DLVAMGLWPR LGAWRRIDAS HRALIDAALA
QVGLADAARR PVAELSAGQW QRALFARLLL QDADVILLDE PFNAVDEQTT TDLLALLAQW
VAQGRTVIAV LHDLAQVRRH FDQTLILSGQ RCRAWGPTAE VLGTVEPSAA VAWLNPSAPW
LQAA
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