| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3557 |
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| Symbol | |
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| ID | 6161196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3976926 |
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| End bp | 3978203 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641666330 |
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| Product | hypothetical protein |
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| Protein accession | YP_001792576 |
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| Protein GI | 171060227 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.159864 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACGCT TTGTGCCGCT GCTGCAACTG GCCGCCCGCA GCGCCTGGAA CCGGCGCTTC
GTGCTGTCGC TGGTGGTGGC GTCGATCGCG CTGTCGACGC TGCTGCTGCT GGGCATCGAG
CGCATCCGCA ACGAGGTGCG CGAGGGTTTT TCGCAGTCGG TCTCGGGCAC CGACCTGATC
GTCGGCGCGC GCACCGGGCC GGTCCAGCTG CTGCTGTATT CGGTCTTCCG CATCGGCAGC
GCCACGAACA ACATCCGCTG GCAGAGCGTG CTGGATCTGT CGCAGCACAA GGCGGTGGCG
TGGACGGTGC CGATCTCGCT GGGCGACAGC CACCGCGGTT ACTCGGTGGT GGCGACCAGC
GCCGGCTACT TCGAGCACTT CCACTACGGC GATCGCCAGC CGCTGGTGCT GGCGCAAGGC
CGGCCGTTTG CCGATGCGGG CGTGTTCGAC GTCGTGCTCG GCGCCGAGGT GGCTCATCGA
TTGAGCTACC GGCTCGGCGA CCGCGTGGTG CTGAGCCACG GCGACGGCGC CATCGCCGCC
AACGACCACG CCGACAAGCC GTTCACGGTG GTCGGCATCC TGGCGCGCAC CGGCACGCCG
GTCGATCGCT CGCTGCACAT CGGCCTGGCC GGCATGGAGG CGATGCACCT CGACTGGATC
GCCGGCGTGC CGCTGCCCGG CATGGCGGTG TCGGCCGAGC AGGCCGTTCT GCAGGACCTG
ACGCCGCGCA ACGTCACCGC CGTGCTGGTC GGGCTCAAGA GCCGCGCGGC GGTGTTCTCG
GTGCAGCGCC GCATCGCCGA CTACCGTGAC GAGCCGCTGA TGGCGGTGCT GCCGGGCGTG
GCGCTCGACG AGCTGTGGGA GGTGGTCGGT GCCGGCGAGC GTGGCCTGCT GGCGGTCAGC
GTGCTGGTGT CGGTCGTCAG CCTGGCCGGG CTGGTGGCGG TGATCCTGGC CGGGCTGAAC
GAGCGCCGCC GCGAGCTGGC GATCCTGCGT GCCGTGGGTT GCGGGCCGCG CACGATGCTG
GCGCTGCTGG CCATCGAGGG TGCGCTCGTC ACGGCGTGCG GCGTGCTGCT CGGGCTGCTG
TCTGGCGCGT TGCTGCTGGC CACGCTGGGT GGCTGGTTCC AGGATCGTTT CGGCTTTGCG
CTGACGCTCT CGCCGCCCGC CGCCAACGAG TGGCTGCTGA TGGCCGCGGT GCTGGCCGGC
GGCTGGCTGG CCAGCCTGGT GCCGGGCTGG CGCGCCTATC GGCTGTCGCT GGCCGACGGG
CTGTCGCCGC GCGCCTGA
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| Protein sequence | MTRFVPLLQL AARSAWNRRF VLSLVVASIA LSTLLLLGIE RIRNEVREGF SQSVSGTDLI
VGARTGPVQL LLYSVFRIGS ATNNIRWQSV LDLSQHKAVA WTVPISLGDS HRGYSVVATS
AGYFEHFHYG DRQPLVLAQG RPFADAGVFD VVLGAEVAHR LSYRLGDRVV LSHGDGAIAA
NDHADKPFTV VGILARTGTP VDRSLHIGLA GMEAMHLDWI AGVPLPGMAV SAEQAVLQDL
TPRNVTAVLV GLKSRAAVFS VQRRIADYRD EPLMAVLPGV ALDELWEVVG AGERGLLAVS
VLVSVVSLAG LVAVILAGLN ERRRELAILR AVGCGPRTML ALLAIEGALV TACGVLLGLL
SGALLLATLG GWFQDRFGFA LTLSPPAANE WLLMAAVLAG GWLASLVPGW RAYRLSLADG
LSPRA
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