| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3538 |
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| Symbol | |
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| ID | 6160910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3955388 |
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| End bp | 3956239 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641666311 |
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| Product | PhzF family phenazine biosynthesis protein |
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| Protein accession | YP_001792557 |
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| Protein GI | 171060208 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0384] Predicted epimerase, PhzC/PhzF homolog |
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| TIGRFAM ID | [TIGR00654] phenazine biosynthesis protein PhzF family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.00577442 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGAAT CGCGCCGCTA CGCCCAGCTG GATGTCTTCA GCGCCGAGCC CCTGCTCGGC
AATCCGCTCG CGGTGGTCGT CGATGCCCGG GGGCTCGACG ACACCACGAT GCAGGCCTTC
GCGCGCTGGA CCAACCTGAG CGAAACCACC TTCCTGCTGC CACCCGAGGA TCCGCGGGCC
GACTACCGGG TGCGCATCTT CACGCCGGCA CGCGAACTGC CGTTCGCGGG TCATCCGACG
CTCGGTTCGT GTCACGCCTG GCTGGCCGCC GGGGGTGTGC CGCATGACGC GGGCGAGGTG
CTGCAGGAGT GCGGCGTCGG CCTGGTCCGG ATCCGCCGGC AGACGGTCGA CGGCCGCACC
CGACTGGCGT TTGCCGCGCC GCCGCTGCGC CGCAGCGGGC CGGTCGATGC GGCGCGGCAT
GCCCGCGTGC TCGCCGCCCT GCGCCTGCCC GCCGAGGCGG TGCGCGCGGT CGAGTGGGTC
GACAACGGCC CGCCCTGGAT CGCCGCGCTG CTGCAGGACG CGCAGGCCGT CCACGCGCTG
CAGCCTGATT TCGCTGCGAT GCAGGGCCTG GAGCTGGGCG TGGTCGGCGC CTATCCGGCG
GGCAGTGCGC TCGACTTCGA GCTGCGTGCC TTCGTGCCCG AACTCGGCGT GCCGGAAGAC
CCGGTCACCG GCAGCCTGAA CGCGGGTGTC GCGCAATGGC TGATCGGCGC CGGTCTCGCG
CCGCGGCGTT ATGTGGCGGG GCAGGGCCGT GCGCTCGGCC GCGACGGCCG TGTTCACGTC
CAGGCCGACG GCGACACGGT CTGGATCGGC GGCGACGTGG CCGAGTGCAT CACCGGGATG
GTCAGGCTGT AG
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| Protein sequence | MSESRRYAQL DVFSAEPLLG NPLAVVVDAR GLDDTTMQAF ARWTNLSETT FLLPPEDPRA
DYRVRIFTPA RELPFAGHPT LGSCHAWLAA GGVPHDAGEV LQECGVGLVR IRRQTVDGRT
RLAFAAPPLR RSGPVDAARH ARVLAALRLP AEAVRAVEWV DNGPPWIAAL LQDAQAVHAL
QPDFAAMQGL ELGVVGAYPA GSALDFELRA FVPELGVPED PVTGSLNAGV AQWLIGAGLA
PRRYVAGQGR ALGRDGRVHV QADGDTVWIG GDVAECITGM VRL
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