Gene Lcho_3536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3536 
Symbol 
ID6161276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp3953909 
End bp3954568 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content70% 
IMG OID641666309 
Productcytochrome B561 
Protein accessionYP_001792555 
Protein GI171060206 
COG category[C] Energy production and conversion 
COG ID[COG3658] Cytochrome b 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0164152 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCGTCT GGGATCTGCC CACGCGGCTG TTCCACTGGA GCCTGTTCGT CTGCGTGGTC 
GGATCGGTGA TCACGGCCAA GGTCGGCGGC AATGCGACGG TGTGGCATTT CCGGCTCGGT 
CTGGCGGTGC TGGCCTTGCT CACGTTCCGG CTGATCTGGG GGCTGGTGGG CGGGCGCTGG 
TCGCGCTTTG CCAGCTTCGT CTATTCGCCG TCCAGCCTGC TGCGGTATCT GCGCGGCCAG 
CCGCAGCCCG GCGATCACTT CGAGGTCGGC CACAACCCCC TGGGCAGCCT GTCGGTGTTT 
GGCCTGCTGG GGGTCATGCT CGTGCAGGTC GGCACCGGGC TGGTGGCCGA CGACGAGATC 
GCCAATGCCG GCCCGTTGAT CGCCCACGTC AGCGGCGCGG TCTCGAGCCT GGCCACGACC 
TGGCACAAGA CCGGCGGGCA GTGGCTGATC TATCTGCTGG TGGGCCTGCA CCTGGCGGCG 
ATCGTCTATT ACCGGGTCGG CAAGCGGGTC GATCTGGTCG GCCCGATGCT GCATGGCGAC 
AAACCTTTGC CCGCGCACGT GCCGCCGTCG GTCGACAGCT GGCCGAGGCG CCTGCTGGCG 
CTGCTGGTGG GCGCGGCGTG TGCGGCGCTG GCGATCTGGG TGAGCCGGCA GGGCGGCTAG
 
Protein sequence
MRVWDLPTRL FHWSLFVCVV GSVITAKVGG NATVWHFRLG LAVLALLTFR LIWGLVGGRW 
SRFASFVYSP SSLLRYLRGQ PQPGDHFEVG HNPLGSLSVF GLLGVMLVQV GTGLVADDEI 
ANAGPLIAHV SGAVSSLATT WHKTGGQWLI YLLVGLHLAA IVYYRVGKRV DLVGPMLHGD 
KPLPAHVPPS VDSWPRRLLA LLVGAACAAL AIWVSRQGG