| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3532 |
|---|
| Symbol | |
|---|
| ID | 6161272 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | - |
|---|
| Start bp | 3950713 |
|---|
| End bp | 3951609 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641666305 |
|---|
| Product | F0F1 ATP synthase subunit A |
|---|
| Protein accession | YP_001792551 |
|---|
| Protein GI | 171060202 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0356] F0F1-type ATP synthase, subunit a |
|---|
| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.0443347 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGCCG AAGAACACGT TGCAGAACAC GCGCCGACCG CCGGGGAATA CATTTCTCAC
CACCTGACGC ACCTGACGAG TCGTGCGCAG GGTGGCATTG CGGACTTCTC TCTTGCTGAT
CCGGTACTGA AGCTGGACTC GCTCTTCTGG TCCATCCTGC TGGGTGTGCT GGGCTCCTTC
TTCCTGTGGC GTGTCGCCCG CAGCGTGACC TCCGGCGTGC CGGGGCGCAT GCAGGCTGCG
GTCGAGTTCC TGGTCGAGAT GGTCGATACC CAGGCCAAGG GCATCATCCA CAACGAGCAG
TCGCGCAAGG TCGTGGCACC GCTGGCTCTC ACGGCCTTCG TCTGGATCTT CCTGATGAAC
GCGATGGACC TGCTGCCGCT GGACCTGATT CCCCGCATCT GGGAAGTCAT CTACGGTGCT
GCGGGCCATG ATCCGCATCA CGCCTACATG CGTGTCGTGC CGACTGCCGA CCTGTCGGTG
ACGCTGGGCA TGTCGATCAC CGTGCTGCTG GCCTGCCTGT ATTACAGCGT CAAGATGAAG
GGCCTGGGCG GCTGGGTCGG CGAGCTGTTC TCGGCGCCTT TCCATGCACA TGGCCCCGCG
GCCATCCTGC TGGCGCCGAT CAACTTCACG CTGCAGATCA TCGAGTTCCT GGCCAAGACC
ATCTCGCACG GCATGCGACT GTTCGGCAAC ATGTTTGCCG GCGAGCTGGT GTTCATGCTG
ATCGCGCTGA TGGGCGCGGT GGGCTTTGGT TCCTTCGGTG GCATCGCGCT GTGGGTCGGG
CAGATCATTG CCGGCACCGC ATGGGCCATC TTCCACATTC TGATCATCAC GTTGCAGGCC
TTCATCTTCA TGATGCTGAC CCTCGTCTAC GTCGGTCAGG CACACGACAA GCACTGA
|
|---|
| Protein sequence | MAAEEHVAEH APTAGEYISH HLTHLTSRAQ GGIADFSLAD PVLKLDSLFW SILLGVLGSF
FLWRVARSVT SGVPGRMQAA VEFLVEMVDT QAKGIIHNEQ SRKVVAPLAL TAFVWIFLMN
AMDLLPLDLI PRIWEVIYGA AGHDPHHAYM RVVPTADLSV TLGMSITVLL ACLYYSVKMK
GLGGWVGELF SAPFHAHGPA AILLAPINFT LQIIEFLAKT ISHGMRLFGN MFAGELVFML
IALMGAVGFG SFGGIALWVG QIIAGTAWAI FHILIITLQA FIFMMLTLVY VGQAHDKH
|
|---|
| |