Gene Lcho_3529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3529 
Symbol 
ID6161808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp3949336 
End bp3949869 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content66% 
IMG OID641666302 
ProductF0F1 ATP synthase subunit delta 
Protein accessionYP_001792548 
Protein GI171060199 
COG category[C] Energy production and conversion 
COG ID[COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 
TIGRFAM ID[TIGR01145] ATP synthase, F1 delta subunit 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0244392 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAGC TCGCTACAGT CGCGCGTCCC TACGCCGAAG CCCTCTACCA GGTCGCCCGT 
CAGGGTGACG TGGCGGTCTG GGTAGAGCAA GTCTCTGCCC TGGCCCAAGT GGCCGAGAAC 
GCCGAACTGC GCCAGTTCGC CGGCAGCCCC AAGGTGTCGG CCGAACAGGT CTACGACGTG 
GTCGCCGCTG CCGCGGGTGT GTCCTTGTCG ACCGGTGTGC AGCACTTCCT GCGCACGGTC 
ATCGACAACG GTCGCCTTGC GGTGCTGCCG GCCATCGCGG TGCAGTTCAA TGCACTGGTG 
AATGCGGCCA GCGGCGTGGC GGATGCCGCG ATTTTCAGTG CCTATCCGAT CGAGCCGGCT 
CAGCTGGCCG AGGTCGTGGC GGCACTGGAG CAGCGGTTCG GCCGCAAGCT GTCCGTGAAC 
GTCACCCTGG AGCCCGAACT CATCGGCGGC ATTCGTGTCG TCGTGGGTGA CGAGGTTCTC 
GACACGTCGG TCAAAGCCCG TCTCGAACGC ATGAAGGTGG CGCTGAGCGC GTGA
 
Protein sequence
MAELATVARP YAEALYQVAR QGDVAVWVEQ VSALAQVAEN AELRQFAGSP KVSAEQVYDV 
VAAAAGVSLS TGVQHFLRTV IDNGRLAVLP AIAVQFNALV NAASGVADAA IFSAYPIEPA 
QLAEVVAALE QRFGRKLSVN VTLEPELIGG IRVVVGDEVL DTSVKARLER MKVALSA