| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3528 |
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| Symbol | |
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| ID | 6161807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3947691 |
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| End bp | 3949229 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641666301 |
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| Product | ATP synthase F1, alpha subunit |
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| Protein accession | YP_001792547 |
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| Protein GI | 171060198 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
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| TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0251899 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACTGA ATCCCGCAGA AATTTCCGAA CTGATCAAGA GCCGCATCGA GGGTCTTGGC
GCAGCCACTG ATGTTCGCAA CCAGGGCACC GTCGTTTCGG TGACCGACGG CATCGTGCGT
GTGCACGGGC TGAGCGACGC GATGGCCGGC GAAATGCTCG AGTTCCCCGG CAACGTCTTT
GGTCTGGCCC TGAACCTGGA GCGCGACTCC GTCGGCGCCG TGATCCTGGG CGAATACGAA
GGCATCTCCG AAGGCGACAC GGTGCGTTGC ACCGGCCGCA TCCTGGAAGT GCCGGTCGGC
CCCGAGCTGA TCGGCCGCGT GGTCAATGCC CTCGGTCAGC CGATCGACGG CAAGGGCCCG
ATCAACGCCA AGATGACCGA CGTGATCGAG AAGGTCGCGC CGGGCGTGAT CGCACGCAAG
TCCGTCGACC AGCCGGTGCA GACCGGTCTG AAGTCGATCG ACTCGATGGT GCCGATCGGC
CGTGGCCAGC GCGAGCTGAT CATCGGCGAC CGCCAGACCG GCAAGACCGC CGTGGCGATC
GACGCGATCA TCAACCAGAA GGGTCAGAAC ATGACCTGCG TCTACGTTGC GATCGGCCAG
AAGGCTTCGT CGATCAAGAA CGTGGTGCGC GCTCTGGAGC AGGCCGGCGC GATGGAATAC
ACCATCGTCG TGGCTGCCTC GGCGTCGGAA TCGGCCGCCA TGCAGTACAT CTCGGCCTAC
ACCGGCTGCA CGATGGGCGA GTACTTCCGT GACCGTGGCG AAGACGCGCT GATCGTCTAT
GACGATCTGT CCAAGCAGGC CGTCGCCTAC CGTCAAGTGT CGCTGCTGCT GCGCCGTCCG
CCGGGCCGCG AAGCCTTCCC CGGCGACGTG TTCTATCTCC ACAGCCGTCT GCTCGAGCGC
GCAGCCCGCG TGAATGCCGA CTACGTCGAG GCGTTCACCA AGGGTGCGGT CAAGGGCAAG
ACCGGTTCGC TGACGGCTCT GCCGGTCATC GAAACGCAAG CCGGTGACGT GTCCGCCTTC
GTTCCGACCA ACGTGATCTC GATCACCGAC GGCCAGATCT TCCTGGAAAC CAGCCTGTTC
AACGCCGGCA TCCGCCCCGC CATCAACGCC GGTATCTCGG TGTCGCGCGT CGGTGGTGCT
GCACAGACCA AGCTGATCAA GGGCCTGTCC GGCGGTATCC GTACCGACCT GGCGCAGTAC
CGTGAACTGG CTGCGTTCGC GCAGTTCGCT TCCGACCTCG ACGCTTCGAC GCGCAAGCAG
CTCGATCGCG GTGCACGCGT GACCGAACTG CTCAAGCAGG CTCAGTACTC GCCGCAGCCG
ATCAGCCTGA TGGGTGCGAC GCTGTACGCG GTCAACAAGG GTTACCTGGA CGACATCGAG
GTGAAGAAGG TCCTGGCCTT CGAATCGGGC ATGCACCAGT ACCTGAAGAC CAGCCACGCC
GCCCTGCTGC AGAAGCTGGA AACGACCAAG GCCCTGGACA AGGACGCGGA AGCCGAGCTG
CAAGGCGCGA TCGCTGCGTT CAAGAAGTCC TTCGCCTGA
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| Protein sequence | MQLNPAEISE LIKSRIEGLG AATDVRNQGT VVSVTDGIVR VHGLSDAMAG EMLEFPGNVF
GLALNLERDS VGAVILGEYE GISEGDTVRC TGRILEVPVG PELIGRVVNA LGQPIDGKGP
INAKMTDVIE KVAPGVIARK SVDQPVQTGL KSIDSMVPIG RGQRELIIGD RQTGKTAVAI
DAIINQKGQN MTCVYVAIGQ KASSIKNVVR ALEQAGAMEY TIVVAASASE SAAMQYISAY
TGCTMGEYFR DRGEDALIVY DDLSKQAVAY RQVSLLLRRP PGREAFPGDV FYLHSRLLER
AARVNADYVE AFTKGAVKGK TGSLTALPVI ETQAGDVSAF VPTNVISITD GQIFLETSLF
NAGIRPAINA GISVSRVGGA AQTKLIKGLS GGIRTDLAQY RELAAFAQFA SDLDASTRKQ
LDRGARVTEL LKQAQYSPQP ISLMGATLYA VNKGYLDDIE VKKVLAFESG MHQYLKTSHA
ALLQKLETTK ALDKDAEAEL QGAIAAFKKS FA
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