| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3522 |
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| Symbol | |
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| ID | 6162119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3939695 |
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| End bp | 3940951 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641666295 |
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| Product | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase |
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| Protein accession | YP_001792541 |
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| Protein GI | 171060192 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00412385 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACGAAC TCCTGTCCGC CGCCGCAGAA CCTGTTCCCG AGCCCGCCCA GCCCAGGCGC
CTGGCCATCA TCGGTGCCGG CCCGGTCGGG CTGGTGCTCG CGCTGCAGGC GCAGCGCCGC
CTGCCGCAGT TGCAGATCAC GGTCTACGAC GCCTTGCCGG CCGAACACGA CGTGTCGGCC
GACGCCCGCA CCCTGGCGCT GGCGCAGGGC TCGGTGCAGG ACCTGACCCG GCTCGGCCTG
TGGCCCCAGA TCGCCGCCCA GGCCGCGCCG ATTCTGGCCG TGCACGTGTC GCAGCAGCAG
CCTGCCTTGC TCGACCTGCT GCCGCTGCCC GGCCGGCGCC CGGGCGGCGA GCCCGAGCTG
CTGATCCGCG CCGAGCAGGA AGGTTTGGCG CAGCTCGGCG CGGTGGCGAG TTACGGCGCC
ATCGTCGCGC CGCTGCGTGC CGCCTGGCTG GACGCCTGCG CGCAGGAGCC GCAGCGCCTG
GCCGCGCGCT GGGGCACCAA GGTCAGCGCG GTGGTGCCTC GGGCCGATGG CGTCGAGATC
GACGCCGGCA TCGTCGAGTC GCATGACCTG GCGGTGATCG CCGAAGGCGG CGTGTTCGCC
GACCAGTCGC GCAAGGCGGT GCACCACGAC TACCGCCAGA CCGCCTGGGT CGGCAGCGTG
TTCGTCGACG GCGGCGAGCC CGGCGTGGCC TACGAGCGCT TCACGCCGCA AGGCCCGGCC
GCGCTGCTGC CGTTGCCACC GAAAGACGGC CGCGCCCGCG CCGCGCTGGT CTGGTGTGTC
GATGCCGACG ACGATCCGGT GCGCGAGCTG AACGACACCC AGCGCCTGGC GGTGCTGCAG
CACGTGCTGC CGGCGCGGGT GGGCAAGCTG GTCGGCATCA GCGCGCTGAA GGCGTTCCCG
CTCGGACTCA ATGCCGAGCG CAGCCTGGTG CAGGGCCGCA CCGTGCGCAT CGGCAACGCG
GCGCAGACGC TGCACCCGGT CGGCGGCCAG GGCCTGAACC TCGGCCTGCG TGACGCCCAG
GCGCTGCTCG CCGCGCTGGC GCGCCACGCC GACATCGACC AGGCGCTCGC CCGGGTGGCC
TGGCAGCGCG CGCCGGACCG CTGGGCCATG ATCGCCGCCA CCGATTTCCT GGCCCGCAGC
TTCACCTGGC CGCTGCCGGG GCTGAACACG CTGCGCGGCG CCGGCTTGTC GCTGCTGCAG
GGCCTGCCGA TGGTGAAGTC GCAGATCGCC CGGCGCATGA TGTTCGGCTC GCGCTGA
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| Protein sequence | MDELLSAAAE PVPEPAQPRR LAIIGAGPVG LVLALQAQRR LPQLQITVYD ALPAEHDVSA
DARTLALAQG SVQDLTRLGL WPQIAAQAAP ILAVHVSQQQ PALLDLLPLP GRRPGGEPEL
LIRAEQEGLA QLGAVASYGA IVAPLRAAWL DACAQEPQRL AARWGTKVSA VVPRADGVEI
DAGIVESHDL AVIAEGGVFA DQSRKAVHHD YRQTAWVGSV FVDGGEPGVA YERFTPQGPA
ALLPLPPKDG RARAALVWCV DADDDPVREL NDTQRLAVLQ HVLPARVGKL VGISALKAFP
LGLNAERSLV QGRTVRIGNA AQTLHPVGGQ GLNLGLRDAQ ALLAALARHA DIDQALARVA
WQRAPDRWAM IAATDFLARS FTWPLPGLNT LRGAGLSLLQ GLPMVKSQIA RRMMFGSR
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