| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3519 |
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| Symbol | |
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| ID | 6162116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3931535 |
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| End bp | 3934327 |
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| Gene Length | 2793 bp |
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| Protein Length | 930 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641666292 |
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| Product | (glutamate--ammonia-ligase) adenylyltransferase |
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| Protein accession | YP_001792538 |
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| Protein GI | 171060189 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[T] Signal transduction mechanisms |
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| COG ID | [COG1391] Glutamine synthetase adenylyltransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0085939 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGGCTGAGC ACGACACTCC AGTGGCGGTA TTGGACCCCA CCCCGCCCAT CCCCACGGCC
GACGCCTCTC ACAGCCGCTT CGTGCAGCGC GTGCGCCGCG CGCTCGCTGC CGACCTGGCG
CTGCTGCCCC CGGGCCCGCC GCGCCGCGCC GAGATCGAAC AGACGCTGGC CGTGCTGCTG
CAGCGCGGCC GCGGCGTGCC GGCGGCCTTG CGGGTGCTGC GCCAGCTGGT GCTCGAGCGC
CTGGCGGTGC TCGACGTGGA GGCCCGCGTG CCGGTCGAGG TCGTCACCTC GGCCATGACC
GAGCTGGCCG AGGTGACGCT CGAACACGCG CTGGGCAGCG CCCGTGCCGA ACTCGATGCC
CAGCATGGCG CACCCCGCAA CGCGGCCGGC GGCGACATCG ATTTCTGGAT CATCGGCATG
GGCAAGCTCG GCGCGCGCGA GCTCAACGTG TCGTCCGACA TCGACCTGAT CTACGTCTAC
GAAGAAGAGG GCCAGACCCT TGGCCGGGCC AACGGCGCCG GCGTGATCTC GGCGCACGAG
TATTTCGCCC AGCTGGCGCG TGGGCTGCGT GCGCTGATCG GCGACGTCAC CGAGGACGGC
TTCGTCTTCC GCATGGACCT GGCGCTGCGG CCCAACGGCA ACGCCGGCCC GCCGGTGGTC
AGTCTGGCGA TGCTGGAGGA GTACTTTCTC GTCCAGGGCC GCGAGTGGGA GCGCTTCGCG
TGGCTCAAGA GCCGCGTGGT GGCGCCGCGC AGCGCCGTGC TGGCCGGCCG TGCCAAGCCG
CTGGCCGATG CGGTGGGGCC GTTCGTCTAC CGGCGCTACC TCGATTACGG CGTGTTCGAG
GGCCTGCGCC AGCTGCATCG CAAGATCCGC GACGAGGCCA ATCGCCGCGC CGCCGGCCGG
CCCGAGCGCG CCAACGACGT CAAGCTGTCG CGCGGGGGCA TCCGCGAGAT CGAGTTCATC
GTGCAGCTGC TGCAGGTGGT GCGCGGCGGC CAGTTCCCCG AGATCCGCAC CCGCTCGACG
GTCAAGGCGT TGTCGCTGCT GGCCGCGGTG GGCATGATCA AGCCCGAGAC CGCCGAGCGG
CTGGCGCAGG CCTATGTCTT CTTGCGCCGG GTCGAGCACC GCATCCAGTT TCTCGACGAT
CAGCAGACCC ACCTGCTGCC CACCGCCGAT GCCGATCTGC GCTGGATCGC CGCCTCGATG
GGGCTGGCCT GCCGGGTCGA CGCCTGCGAG CTGATCGAGC AGCTGTGCGC GCACCGCGAG
GTGGTCGCCA CCGAGTTCGA CGCGCTGCTG CACGACGGCC GCCCGCCCCA GCGTGGCAAC
GGCGGCTCGG GCTGCCGCAA CTGCGGCGGC GAGCCGCTCA GCCTCGACAG CCCGGCGCTG
CTGGTCGGCC TGAACCCGGC GGTGGCCGAG CGGGTGCAGC GCTTTGTCGA ACACCCGCGG
GTGGTGCTGC TGCGCGACGA GGCGCGCCAG CGCCTGACGC ACCTGTTCGC CCGCGCGCGC
CGCATCATCG AGGCGCAGAC CACGCTGACG CCGGCGCAGC GCGACGAGGC GCTGCTGCGT
TTCATCGACT GGGTCGAGCC GCTGCTGCGC CGCGACAGCT ATCTGGCGCT GCTGGCCGAA
CGGCCGCAGG TGCTGGGCCG GCTGCTGCAG CTGCTGGGCC TGGCGCGCTG GCCGATGCGC
TACCTCATGC AGCACCCGGG CGTGATCGAC GAGCTGGCCG ACGCGCGCAT GTCGCACCAG
CGCTTCGACC CGCGGGCCTA CCGGTCCGAT CTCGACGAGC GCCATCTGGC CTGGATGCGC
TCCGGCCAGG CCGACGAGGA GTCGCTGCTC GACACGCTGC GGCGCGCCCA CCAGGCCGAG
ACCTTCCGCA TCCTGGTGCG CGACGTCGAG GGCGAGATCA GCGTCGAGCA GGTCGCCGAC
GACCTGTCGG CGCTGGCCGA CGCCACGCTC GAATGCGGCA TGTGCTGGGC CTGGCAGCAC
CTGCGCCAGC GCCACCGCGC CGAGCCGCAG TTCGCGGTCA TCGCCTACGG CAAGCTGGGC
GGCAAGGAGC TCGGTTACGG CAGCGATCTC GACCTGGTCT TCGTCTACGA GGACGACGAC
GAACGCGCCG CCGAGATCTA CGCCGCGTTC GCGCGCAAGC TGATCACCTG GCTGTCGCTG
CGCACCTCGG CGGGCGCGCT CTACGAGATC GACACCGCCT TGCGGCCCAA CGGCAACTCC
GGCCTGCTGG TGACGTCGCT GGCGTCGTTC GAGCGTTATC AGCAGGGCCG CGGCAGCAAC
ACCGCCTGGA CCTGGGAGCA CCAGGCCATC ACGCGGGCGC GCTGGTGTGC GGGCCTGCCG
GCGCTCGATG CACGGTTCGA GGCGACGCGC CGCAGCGTGC TGTGCGCGCC GCGCGATTTC
CCCGCGCTGC GCGAGGAGGT GCGTGTCATG CGCGAGCGCA TGCGCGCGGC GCAGAACCTG
CGAGCCGACC GGTTCGAGCT CAAGCACAGC CCGGGCGGCA TGATCGACGT CGAGTTCGCG
GTGCAGCTGC TGGTGCTGGC GCACAGCGCC GTGCATCCGG GCCTGATGGA CAACCTCGGC
AACATCGCCT TGCTCGGCCG TGCCGAACAG GTCGGCCTGC TGCCCGAAGG TGTAGGCACC
GCCGCGGCCG ACGCCTACCG CGAGATGCGC CGGGCCCAGC ACCGGGCGCG GCTCGACGAA
GCCAGCACCG CCTTCGACCT GGCCGAACTC GGCCCGCTGG CGGCGCACCG CGAAGCCGTG
CTGGCGCTCT GGCGGGCCGT CTTCGGCGCC TGA
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| Protein sequence | MAEHDTPVAV LDPTPPIPTA DASHSRFVQR VRRALAADLA LLPPGPPRRA EIEQTLAVLL
QRGRGVPAAL RVLRQLVLER LAVLDVEARV PVEVVTSAMT ELAEVTLEHA LGSARAELDA
QHGAPRNAAG GDIDFWIIGM GKLGARELNV SSDIDLIYVY EEEGQTLGRA NGAGVISAHE
YFAQLARGLR ALIGDVTEDG FVFRMDLALR PNGNAGPPVV SLAMLEEYFL VQGREWERFA
WLKSRVVAPR SAVLAGRAKP LADAVGPFVY RRYLDYGVFE GLRQLHRKIR DEANRRAAGR
PERANDVKLS RGGIREIEFI VQLLQVVRGG QFPEIRTRST VKALSLLAAV GMIKPETAER
LAQAYVFLRR VEHRIQFLDD QQTHLLPTAD ADLRWIAASM GLACRVDACE LIEQLCAHRE
VVATEFDALL HDGRPPQRGN GGSGCRNCGG EPLSLDSPAL LVGLNPAVAE RVQRFVEHPR
VVLLRDEARQ RLTHLFARAR RIIEAQTTLT PAQRDEALLR FIDWVEPLLR RDSYLALLAE
RPQVLGRLLQ LLGLARWPMR YLMQHPGVID ELADARMSHQ RFDPRAYRSD LDERHLAWMR
SGQADEESLL DTLRRAHQAE TFRILVRDVE GEISVEQVAD DLSALADATL ECGMCWAWQH
LRQRHRAEPQ FAVIAYGKLG GKELGYGSDL DLVFVYEDDD ERAAEIYAAF ARKLITWLSL
RTSAGALYEI DTALRPNGNS GLLVTSLASF ERYQQGRGSN TAWTWEHQAI TRARWCAGLP
ALDARFEATR RSVLCAPRDF PALREEVRVM RERMRAAQNL RADRFELKHS PGGMIDVEFA
VQLLVLAHSA VHPGLMDNLG NIALLGRAEQ VGLLPEGVGT AAADAYREMR RAQHRARLDE
ASTAFDLAEL GPLAAHREAV LALWRAVFGA
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