Gene Lcho_3516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3516 
Symbol 
ID6161361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp3928625 
End bp3928867 
Gene Length243 bp 
Protein Length80 aa 
Translation table11 
GC content65% 
IMG OID641666289 
Productglutaredoxin 3 
Protein accessionYP_001792535 
Protein GI171060186 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0695] Glutaredoxin and related proteins 
TIGRFAM ID[TIGR02181] Glutaredoxin, GrxC family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.00134077 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTACACCA CGCAGGTCTG CCCGTACTGC CAGCGTGCGA AGGCCCTGCT CAAGCAACGC 
GGCGTCGAGC ACGTCGAGGA AATCCGCATC GACCTCGATC CGGTGCAGCG CAACCACATG
ATGGAGATCA CCGGACGGCG CACCGTGCCG CAGATCTTCA TCGGCGACAC CCATGTCGGT
GGCTGCGACG ACCTGATGGC GCTCGATCAC GCCGGCGGCC TCCACACGCT GCTGCAAGCC
TGA
 
Protein sequence
MYTTQVCPYC QRAKALLKQR GVEHVEEIRI DLDPVQRNHM MEITGRRTVP QIFIGDTHVG 
GCDDLMALDH AGGLHTLLQA