Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3515 |
Symbol | |
ID | 6161360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 3928069 |
End bp | 3928491 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641666288 |
Product | rhodanese domain-containing protein |
Protein accession | YP_001792534 |
Protein GI | 171060185 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0607] Rhodanese-related sulfurtransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.00152607 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGGCGGACA CCCGCGTGAC CTTCCTTCTC GACAACTGGT ATTGGATTGC AGCCGCGCTC GTGTCCGGTG GCGCGCTGAT GTGGCCGATG CTCAAGGGCG GCGATGCCGA CGCGATCGGC GTCACGCAGG CCGTGCAGCT CATCAACCGC GAAAAGGCGG TGGTGATCGA CGTCTGCACG AAAGACGAAT ACGCCGCGGG CCATGTCGCC AACTCCCGCA ACGTGCCGCT GGCCGACCTG GAGTCGAGCA AGAACCTGCC GACCAACAAG GCGCTGCCGC TGGTGGTGGT GTGCGCCACG GGCACACGCG CCAGCCGCGC CATCGGCACG CTGACCAAGC TCGGGCACCA GCGCGTCCAC GTGCTGTCCG GCGGCCTGGC GGCCTGGCGC GAAGCGAATC TGCCGGTCGA AAAATCCGCC TGA
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Protein sequence | MADTRVTFLL DNWYWIAAAL VSGGALMWPM LKGGDADAIG VTQAVQLINR EKAVVIDVCT KDEYAAGHVA NSRNVPLADL ESSKNLPTNK ALPLVVVCAT GTRASRAIGT LTKLGHQRVH VLSGGLAAWR EANLPVEKSA
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