Gene Lcho_3515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3515 
Symbol 
ID6161360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp3928069 
End bp3928491 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content67% 
IMG OID641666288 
Productrhodanese domain-containing protein 
Protein accessionYP_001792534 
Protein GI171060185 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.00152607 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGGCGGACA CCCGCGTGAC CTTCCTTCTC GACAACTGGT ATTGGATTGC AGCCGCGCTC 
GTGTCCGGTG GCGCGCTGAT GTGGCCGATG CTCAAGGGCG GCGATGCCGA CGCGATCGGC
GTCACGCAGG CCGTGCAGCT CATCAACCGC GAAAAGGCGG TGGTGATCGA CGTCTGCACG
AAAGACGAAT ACGCCGCGGG CCATGTCGCC AACTCCCGCA ACGTGCCGCT GGCCGACCTG
GAGTCGAGCA AGAACCTGCC GACCAACAAG GCGCTGCCGC TGGTGGTGGT GTGCGCCACG
GGCACACGCG CCAGCCGCGC CATCGGCACG CTGACCAAGC TCGGGCACCA GCGCGTCCAC
GTGCTGTCCG GCGGCCTGGC GGCCTGGCGC GAAGCGAATC TGCCGGTCGA AAAATCCGCC
TGA
 
Protein sequence
MADTRVTFLL DNWYWIAAAL VSGGALMWPM LKGGDADAIG VTQAVQLINR EKAVVIDVCT 
KDEYAAGHVA NSRNVPLADL ESSKNLPTNK ALPLVVVCAT GTRASRAIGT LTKLGHQRVH
VLSGGLAAWR EANLPVEKSA