| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3514 |
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| Symbol | |
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| ID | 6161359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3927254 |
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| End bp | 3927997 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641666287 |
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| Product | phosphoglycerate mutase 1 family protein |
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| Protein accession | YP_001792533 |
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| Protein GI | 171060184 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0588] Phosphoglycerate mutase 1 |
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| TIGRFAM ID | [TIGR01258] phosphoglycerate mutase, BPG-dependent, family 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0019746 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTACAAGC TCGTGCTGAT CCGCCACGGT GAATCGACCT GGAACCTGGA GAACCGTTTC
ACCGGCTGGA CCGACGTGGA GCTCACGCCC ACCGGTGTCT CGCAGGCCCA GCAGGCCGGA
CGCCTGCTCA AGGAGGGCGG CTACGAATTC GACATCGCCT ACACCTCGGT GCTCAAGCGC
GCGATCTGGA CGCTCTGGCA TGCGCTCGAC CAGATGGACC GCACCTGGCT TCCGGTGGCG
CACAGCTGGC GCCTCAACGA GCGCCACTAC GGCGCGCTGC AGGGCCTCAA CAAGGGCGAC
ATGGCCAAGC AGTACGGCGA CGCGCAGGTG CTGATCTGGC GCCGCAGCTA CGACACGCCG
CCGCCGGCGC TCGAAGCCGA TGACCCGCGC GGCCAGCGCC AGGATGTCCG CTACGCCAAG
CTCGACGCCG AGCAGGTGCC GCTCACCGAG TGCCTCAAGG ACACCGTGGC GCGGGTGCTG
CCGTTCTGGA ACGACTCGAT CGCGCCGGCC ATCCTGTCGG GCAAGCGGGT GCTGATCGCC
GCGCACGGCA ACTCGATCCG CGCGATGGTG AAGTACCTCG ACGGCATCAG CGACGCGGAC
ATCGTCAACC TCAACATCCC CAACGGCGTG CCGCTGGTCT ATGAGCTCGA TGCCGACCTG
AAGCCGATCC GCAGCTATTA CCTCGGTGAT GCCGAGGCGG TGGCCAAGGC CGCGGCGGCT
GTTGCCAACC AGGGCAAGGC CTGA
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| Protein sequence | MYKLVLIRHG ESTWNLENRF TGWTDVELTP TGVSQAQQAG RLLKEGGYEF DIAYTSVLKR
AIWTLWHALD QMDRTWLPVA HSWRLNERHY GALQGLNKGD MAKQYGDAQV LIWRRSYDTP
PPALEADDPR GQRQDVRYAK LDAEQVPLTE CLKDTVARVL PFWNDSIAPA ILSGKRVLIA
AHGNSIRAMV KYLDGISDAD IVNLNIPNGV PLVYELDADL KPIRSYYLGD AEAVAKAAAA
VANQGKA
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