Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3512 |
Symbol | |
ID | 6161357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 3925964 |
End bp | 3926695 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641666285 |
Product | ubiquinone/menaquinone biosynthesis methyltransferase |
Protein accession | YP_001792531 |
Protein GI | 171060182 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
TIGRFAM ID | [TIGR01934] ubiquinone/menaquinone biosynthesis methyltransferases |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.000892399 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAGCGACA CGCATTTCGG ATTCAAGACG GTCGACGAGC GCCAGAAGGC CGATCTGGTT CGAGGCGTCT TCGACTCGGT GGCATCGCGT TACGACGTGA TGAACGACGC CATGTCGATG GGCATGCACC GGCTCTGGAA GGCCTACGCG GTCGCTGTTT CAGGTGCGCG GGAAGGCCAT CAGGTGCTCG ACATCGCCGC CGGCACCGGC GACCTCACGC GGCAGTTCGC GCGCAAGGTC GGGGCCAGCG GCACGGTCGT CCACACCGAC ATCAACGAGT CCATGTTGCG CACCGGACGT GACCGGCTGC TCGACGAAGG GCTGCAACTC CCGACGGTGC TGTGCGATGC CGAGCGCCTG CCGTTCCCTT CGGCCCGATT CGACATCGTC AGCGTGGCGT TCGGCCTGCG CAACATGACC CACAAGGATG TGGCGTTGGG CGAAATGGCT CGGGTGCTCA AGCCCGGCGG CAAGCTCCTG GTGCTGGAGT TCTCCCGTGT CGCCGAGCCG CTCCGGCGCG CGTATGACTG GTACTCGTTC AACGTGCTGC CACGTCTCGG TCAGGTGCTC ACGGGTGATG CGCAGAGCTA CCGCTATCTG GCCGAGTCGA TCCGCATGCA TCCGCCTCAG GCCGAGCTGA AATCGATGAT GAAGACGGCG GGTTTCGGGC ACGTCGACGT GCACAACATG TCGGCCGGCG TGGTCGCCCT GCATGTCGGC CTGAAGTGCT GA
|
Protein sequence | MSDTHFGFKT VDERQKADLV RGVFDSVASR YDVMNDAMSM GMHRLWKAYA VAVSGAREGH QVLDIAAGTG DLTRQFARKV GASGTVVHTD INESMLRTGR DRLLDEGLQL PTVLCDAERL PFPSARFDIV SVAFGLRNMT HKDVALGEMA RVLKPGGKLL VLEFSRVAEP LRRAYDWYSF NVLPRLGQVL TGDAQSYRYL AESIRMHPPQ AELKSMMKTA GFGHVDVHNM SAGVVALHVG LKC
|
| |