| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3507 |
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| Symbol | |
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| ID | 6160954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3920801 |
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| End bp | 3921718 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641666280 |
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| Product | putative exopolysaccharide biosynthesis protein |
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| Protein accession | YP_001792526 |
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| Protein GI | 171060177 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG0489] ATPases involved in chromosome partitioning |
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| TIGRFAM ID | [TIGR01007] capsular exopolysaccharide family
[TIGR03018] exopolysaccharide/PEPCTERM locus tyrosine autokinase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00000000503243 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCATCA TTGAACAGGC AGCCAAGCGC CTGGAAGAAC TGCGCCGTGC CGGGATTGAA
GTACCGGTGG TTCCGATGCC GACAGGCGCT CCAGCGGCAG CCGGACGTGC ATTGCCGACC
CCTCTTCCGG TTGCACCGGC TGAACTTGCC CCCACGGTCA ATGCCGATCT GGAGCAGGCG
GTTGCGCGGC GCTCGCGCGA GGTCGTCATC GACCTCGCAC GGCTCGAGCG AGAGGGTTAT
CTGGTGCCGT CTCAGGCCAG GTCGAAGCTT GCCGAACAGA TGCGCATCAT CAAGCGTCCA
CTGCTGGCCA ATGCGAACGG AGACTCCGGC CAGACGATCC CTCGCGCCAA CCTGATCCAG
GTGGTCAGCG CCATGCCCGA GGAAGGCAAG ACCTTTTTTG CCATCAATCT GGCCATGAGC
ATTGCCATGG AGGTCGATCA CCACGTTCTG CTGGTCGATG CCGATGTCCT CCGACCGTCC
GTGTTGCGGC GCCTGGGCGT CGAGCCGGCA CCCGGTTTGC TGGATGTGCT GCAGTCCAAG
GACCTGCCGC TTTCCGACGT GCTGTTGCGT ACCAATGTCG AAAAGCTCAG CATCCTGCCA
GCCGGTGCGG CCAATCAGAA ATCGACCGAA CTGCTGGCCA GCGCTGCAAT GAGCAATCTG
CTGGACGAGT TGGCGGCCAA GTACTCGGAT CGCATCATCG TGTTTGATGC ACCACCTCTG
ATTCCCACCA CTGAATCCCG GGTGCTCGCT TCTCACGTCG GCCAGGTCGT GATGGTGGTC
GAGGCCGAGA AGACCACGCA CTCGGTGGTG ACGCAGGCCT ATGCCGCAGT CGCCCAGTGC
CCGGTGGTTC TGTCTGTGCT CAACAAGTGT CAGAACAAGG GAGCGAGTGA TGCCTACGGC
TATTACTACT CGGCTTGA
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| Protein sequence | MSIIEQAAKR LEELRRAGIE VPVVPMPTGA PAAAGRALPT PLPVAPAELA PTVNADLEQA
VARRSREVVI DLARLEREGY LVPSQARSKL AEQMRIIKRP LLANANGDSG QTIPRANLIQ
VVSAMPEEGK TFFAINLAMS IAMEVDHHVL LVDADVLRPS VLRRLGVEPA PGLLDVLQSK
DLPLSDVLLR TNVEKLSILP AGAANQKSTE LLASAAMSNL LDELAAKYSD RIIVFDAPPL
IPTTESRVLA SHVGQVVMVV EAEKTTHSVV TQAYAAVAQC PVVLSVLNKC QNKGASDAYG
YYYSA
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