| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3506 |
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| Symbol | |
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| ID | 6160953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3919246 |
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| End bp | 3920733 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641666279 |
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| Product | hypothetical protein |
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| Protein accession | YP_001792525 |
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| Protein GI | 171060176 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03016] uncharacterized protein, PEP-CTERM system associated |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.000000132371 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGTGCG CCGTCGTGCT CAATGCAGCC CAGGCTGCTT CGGCTCAGTC GGTGGTCGTG
CAGCCGGCTG TGCAGGTCAG AAGCGTGACC ACCAACAACG TCTCGTTTGC CGAGGCCGAG
GTGGCTCGCT CCGATTCGGT CCTGATCGTC ACGCCCAGGC TGGACGTGTT GACGGTCAAT
CCAGGCTACA GGCTGAATGC TTCGCTCGCC GCGGATGCCG TCACCTATCT CGGGCGCAGT
CAGGCAGATC GCCTGCTTCC TCGCGCGCAG GCCGATCTGA CGGCGCAACT GGTCGAGCGG
TGGCTGTTCG TCGACGGCAG GCTGAGTGCC GACACCACGG CGGGCAATCC ATTTGGCGTG
CTCGAGGACG AGTCCTCGAC GATCTTCAAT CGGACCACGG TCTATCGCCA GCGCATCAGC
CCCTATGTCG AGCGTGAACT GAGTCCTCGC GAGCGCCTGC AACTGCGCAC GGACCACAGC
TGGTTCCAGA ACCGCAATGC CGGGGGCACG GATACGCGGA TCGATACCTA TCTGCTATCG
CAGCGTGCCA GCTACGAGCT GCGCCCTCAA CCGCTGGGAC TGCGGGCCGA GTACACGCGA
GACTCTTCCG ATTACTCGAA CCTGCCCGAC AGCAGTGTCC TGTTCGAGAC TGCGCGACTG
AGCGCCATGT ACGAGGCCGC ACCGCAACTG GTGCTGACAC TCACGGCTGG CAGTGATCAC
GCCCGTTACA GCGGCATCGA CCAGCGCGAG ACCCTGAGAG GTTTCGGATT GCGTTGGGAG
CCATCCGAAC GCACGTCAGT CGGCGCCTTG GTCGAGAAGC GGTTCTTCGG TACGGGCTGG
GCGGTCAATC TGGCGCATCG TGCTCCTTTC CTGGTTCTCA ATGCCGACAT GCAGCGTCGA
TCGACCACCT ATGCCGCACA GGTGGCCGCC TTGCCGGCCG GCGGCGATGT GGCGCAATTG
CTCGATTCAT TGCTCAGCAC CCGGATCACC AATCCGGTCG AGCGTGCCAC GGCCGTGCAG
CAGCTGATCG CGCAACGCGG GTTGCCGGCC ACTCTTGCGA GTGCGCTGGA CCTGTTCTCG
CCCAGCGCCC AGTTGCTCAA CTCGGCCAGC CTGTCTGCGG CGCTGCTCGG TGTGCGCCAT
ACGATCACCC TCAGAGGTTT CTACGATCGA ACCGAAGACC TGATCGGCGT CAATCCGCCG
CCGCTGTTCT CCAGCAATGC ACGGCAATAT GGCGCGTCGC TCGGCATGAC CCGACGCCTG
CAGCCCGATG CCACGGCGGA TTTCAGCCTC ACCCGCAGTC GCGTGGTCGG GTTCGGCACC
AACGCCGGCG TGGTCACGAA CAATCTCAGC GTTCGCTTCG GCGCCAGCCG CCAGCTTTCA
CTGCGCACGA CCGTGTCGGC GGCGCTGCGT CGCCAGTGGG TCGATTCGAC CGCGGTCACC
AATGCCAATC AGACCGCCTT GTCGTTCGGT CTGCTCCACC GCTTCTGA
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| Protein sequence | MLCAVVLNAA QAASAQSVVV QPAVQVRSVT TNNVSFAEAE VARSDSVLIV TPRLDVLTVN
PGYRLNASLA ADAVTYLGRS QADRLLPRAQ ADLTAQLVER WLFVDGRLSA DTTAGNPFGV
LEDESSTIFN RTTVYRQRIS PYVERELSPR ERLQLRTDHS WFQNRNAGGT DTRIDTYLLS
QRASYELRPQ PLGLRAEYTR DSSDYSNLPD SSVLFETARL SAMYEAAPQL VLTLTAGSDH
ARYSGIDQRE TLRGFGLRWE PSERTSVGAL VEKRFFGTGW AVNLAHRAPF LVLNADMQRR
STTYAAQVAA LPAGGDVAQL LDSLLSTRIT NPVERATAVQ QLIAQRGLPA TLASALDLFS
PSAQLLNSAS LSAALLGVRH TITLRGFYDR TEDLIGVNPP PLFSSNARQY GASLGMTRRL
QPDATADFSL TRSRVVGFGT NAGVVTNNLS VRFGASRQLS LRTTVSAALR RQWVDSTAVT
NANQTALSFG LLHRF
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