| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3504 |
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| Symbol | |
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| ID | 6160951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3915698 |
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| End bp | 3916738 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641666277 |
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| Product | signal recognition particle-docking protein FtsY |
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| Protein accession | YP_001792523 |
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| Protein GI | 171060174 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0552] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00064] signal recognition particle-docking protein FtsY |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.000000132371 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTCAGTT TCCTGCGCCG CAAGGCAACC CCGCCGCCGC CGACGGTGGC ACCCGTGACC
CCGGAATCGC CGGCCGTCGA GGTCGTCAGC GCACCGCCAC CCGCCGCCGT CGAGAACCGC
GGCGGCTGGC TGAACCGCCT GAAGCAGGGC CTGCGCCGCA CCGGCTCGTC GATCGCCCAG
GTGTTCACCG GCACGCAGAT CGACGATGCG CTCTACGAAG ACCTGGAAGC CGCGCTGCTG
GTCGCCGACG CCGGGGTCGG CGCCACGCAG TTTCTGCTCA ACGACCTCAA GCGCCGGGTC
AAGGAGACCC GCACCACCGA CCCGGGCGCC GTCAAGGCCC TGCTGGCCGA TGCGCTGACC
GACCTGCTGA CGCCGCTCCA GGGCACGCTG AAGGTCGATG CCCAGCAGCC CACGGTGATC
ATGGTGGCGG GTGTCAACGG TGCCGGCAAG ACCACCACCA TCGGCAAGCT CACGCGCAAC
CTGGCCGAGG CCAACTGCAA GGTGCTGCTG GCCGCCGCCG ACACGTTCCG GGCCGCCGCG
CGCGAGCAGC TGGCGGTGTG GGCCGACCGC AATCAGGTCG AGATCGTCAG CCAGGAGGGC
GGCGACCCGG CCGCCGTCTG CTTCGACGCC ATCTCGGCCG GCCGCGCGCG CGGCTGCGAC
GTCGTCATCG CCGACACCGC CGGACGGCTG GCCACCCAGC TGCATCTGAT GGAGGAGCTG
CGCAAGATCC ACCGCAGCAT CGGCCGGGCC ATGCCGGGCG CGCCGCACGA AGTGCTGCTG
GTGGTCGATG GCAACACCGG CCAGAACGCG CTAGCACAGG TCAAGGCCTT CGACACGGCC
CTCGGCCTGA CCGGCCTGGT CGTCACCAAG CTCGACGGCA CCGCCAAGGG TGGCGTGCTG
GCAGCCATCG CGCTGTGGGG GCGTGAACGG CAGGCGCGCG GGCTGGGCGC CGTGCCGGTC
TACTTCATCG GCGTCGGTGA AAGCCTGGCC GACCTTCAGA CCTTCGACGC CCGGGAGTTC
TCGCAGGCCT TGCTGAACTG A
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| Protein sequence | MFSFLRRKAT PPPPTVAPVT PESPAVEVVS APPPAAVENR GGWLNRLKQG LRRTGSSIAQ
VFTGTQIDDA LYEDLEAALL VADAGVGATQ FLLNDLKRRV KETRTTDPGA VKALLADALT
DLLTPLQGTL KVDAQQPTVI MVAGVNGAGK TTTIGKLTRN LAEANCKVLL AAADTFRAAA
REQLAVWADR NQVEIVSQEG GDPAAVCFDA ISAGRARGCD VVIADTAGRL ATQLHLMEEL
RKIHRSIGRA MPGAPHEVLL VVDGNTGQNA LAQVKAFDTA LGLTGLVVTK LDGTAKGGVL
AAIALWGRER QARGLGAVPV YFIGVGESLA DLQTFDAREF SQALLN
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