Gene Lcho_3502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3502 
Symbol 
ID6159986 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp3914364 
End bp3914864 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content65% 
IMG OID641666275 
Productpantetheine-phosphate adenylyltransferase 
Protein accessionYP_001792521 
Protein GI171060172 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0669] Phosphopantetheine adenylyltransferase 
TIGRFAM ID[TIGR00125] cytidyltransferase-related domain
[TIGR01510] pantetheine-phosphate adenylyltransferase, bacterial 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones9 
Fosmid unclonability p-value0.0000000195906 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGACCCCGG TGACGCAGGA ACTCACAGCC ATCTATCCCG GCACTTTCGA CCCGATGACG 
CTGGGCCACC AGGATCTGAT GCGCCGCGCC AGCCGGCTGT TCAGTCGCCT GATCGTCGCC 
GTGGCCGCAG GGCATCACAA GCGCACGATG TTCAGCGTCG AGGAGCGGCT GGAGATCGCG 
CGGGAACTGG CGGCCAAGTA CCCCAATGTC GAGGTGGTGG CGTTCCGCGG CCTGTTGCGC 
GATTTTGTCG TCGAGCACGG TGGCAAGGTG GTCGTGCGCG GCCTGCGTGC CGTCAGCGAC 
TTCGAATACG AGTTCCAGAT GGCCGGCATG AACCGCCAGC TGATGCCCGA GGTGGAAACC 
CTGTTCCTGA CGCCGAGCGA TCAGTACCAG TTCATCAGCG GCACCTTCGT GCGCGAGATC 
GCGGTGCTGG GTGGCGACGT GTCGAAGTTC GTGGCGCCGT CGGTGCTCGA GCGCCTGCAG 
CGTCGCGTCA CCCAGAAATG A
 
Protein sequence
MTPVTQELTA IYPGTFDPMT LGHQDLMRRA SRLFSRLIVA VAAGHHKRTM FSVEERLEIA 
RELAAKYPNV EVVAFRGLLR DFVVEHGGKV VVRGLRAVSD FEYEFQMAGM NRQLMPEVET 
LFLTPSDQYQ FISGTFVREI AVLGGDVSKF VAPSVLERLQ RRVTQK