| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3494 |
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| Symbol | |
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| ID | 6160009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3907089 |
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| End bp | 3907919 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641666266 |
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| Product | formamidopyrimidine-DNA glycosylase |
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| Protein accession | YP_001792513 |
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| Protein GI | 171060164 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00000130879 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCTGAAT TGCCGGAAGT CGAAGTCACG CGCCTCGGTC TGGTCGACCG CATCGGCGGC
GCCACGGTGC GCGCCCTGCA GCTGGGCAAG CCGCTGCGCT GGCCGATCGG CGTGGCGCCG
CAGCAGCTGG CGGGCCAGCG CATCGGCGAG CTGGCGCGGC GCGGCAAGTA CATCTGGATG
CCGCTGCAGG ACGGCAGCAC GCCGGCCGGT GGCCTGCTCT GGCATCTGGG CATGTCGGGC
TCGCTGCGCT TCGAGGCGCA GCTGCCGCCG CCCGGCCCGC ACGATCACGT CGAGCTGGTC
ACCGACCGCG GCAGCCTGCG CCTGACCGAC CCGCGCCGCT TCGGCGCAGT GGTCTGGTCG
CCGTCGCTCC AGGCCGGCTG CGCCGCCAGG CTGCTCGGCG GGCTGGGTGT CGAGCCGCTC
GAGGACGGCT TCACCGCCAG CGTGCTGCAC CAGGGTCTGC GCGGGCGTCG GGTGGCGATC
AAGCAGGCGC TGCTGGCGGG CGACATCGTC GTCGGCGTGG GCAACATCTA TTGTTCCGAG
GCGCTGTTCG TGGCCGGCAT CGATCCCCGA CTGGCGGCGC AGCGCCTGAG CCTGGCGCGC
TGCGAGCGGC TGGTCCAGGC GATCCGCCAA GTGCTGCGCC AGGCGCTGAT GGCGGGCGGT
TCGACGCTGC GCGACTTCCG CGATGCCCAC GGCATGGGCG GCGCATTCCA GCTCCAGGCG
CAGGTCTACG ATCGCGCCGA TCAGCCGTGC CGGCGCTGCG GCGCGCTCGT GCGCCGCATC
GTCCAGGGCC AGCGTGCAAC ATATTTCTGT CCGGTTTGCC AGCGCCGTTG A
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| Protein sequence | MPELPEVEVT RLGLVDRIGG ATVRALQLGK PLRWPIGVAP QQLAGQRIGE LARRGKYIWM
PLQDGSTPAG GLLWHLGMSG SLRFEAQLPP PGPHDHVELV TDRGSLRLTD PRRFGAVVWS
PSLQAGCAAR LLGGLGVEPL EDGFTASVLH QGLRGRRVAI KQALLAGDIV VGVGNIYCSE
ALFVAGIDPR LAAQRLSLAR CERLVQAIRQ VLRQALMAGG STLRDFRDAH GMGGAFQLQA
QVYDRADQPC RRCGALVRRI VQGQRATYFC PVCQRR
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