| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3492 |
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| Symbol | |
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| ID | 6160007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3903716 |
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| End bp | 3904870 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641666264 |
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| Product | A/G-specific adenine glycosylase |
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| Protein accession | YP_001792511 |
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| Protein GI | 171060162 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1194] A/G-specific DNA glycosylase |
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| TIGRFAM ID | [TIGR01084] A/G-specific adenine glycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0000130303 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGAGCCGCG CCGCCACGGC CGAGCTGCCA TCCATCGCCG CCGATCTGGT GCGCTGGCAG
CGCCAGCACG GCCGCCACGG CCTGCCCTGG CAGGCCAGCC GCGACCCGTA TCGCGTCTGG
CTGTCCGAGG TCATGCTGCA GCAGACCCAG GTTGCCACCG TGCTCGGTTA CTACGAGCGC
TTCCTGCAGC GCTTTCCCGA CATCGCCGCG CTCGCCGCCG CGCCGCTCGA CGACGTGCTG
GCGCTGTGGA GCGGCCTGGG CTACTACAGC CGCGCGCGCA ACCTGCACCG TTGCGCGCAG
GTGGTGGTGG CCGAACACGG CGCTGCGCTG CCGCGCCGTG CCGAGCAGCT GGTCGAGCTG
CCGGGCATCG GCCCCTCGAC CGCCGCCGCC ATCGCCTCGT TCTGCCACGG CGAGCGGGTC
TCGATCTTCG ACGGCAACGT CAAGCGCGTG CTCGCGCGGC TGCTGGCGTT CGAGGGCGAC
CTGGCCCAGG CGGGCGCGGC CAAGGTGCTG TGGGCGCAGG CCGACCGGCT GGTGCCGACC
GACGCCGCCG ACATGCCGGC CTACACCCAG GGCCTGATGG ACCTGGGCGC CACGGTCTGC
ACGCCGCGCG ATCCGCAATG CCCCGCCTGC CCGCTGCAGC GCGCCTGCCG CGCGCATGCC
GCCGGGTCGG TCCTGACCTA TCCGATCAAG TCGCGCAAGC TCAAGCGCAG CCGGCGCGAG
AACTGGTGCC TGTGGCTCAG CCTGGGCGAC GCGGTCTGGC TGCAGCAGCG TCCCGACACC
GGCATCTGGG CGGGGCTCTG GGCCTGGCCC TTGTTCGACG ACACCGACGC GGTCGAGCGC
CTGACGGCGC AGCTGCTCGC CGCCCTCGGC GGCCATGCCG AGCGGCTGCA GGCGAACCGC
CTGCCCGGCT TCGTGCACGT GCTCACGCAC CTCGACTGGA CGCTGCACCC CTGCCGCCTG
CACCTGCCGG CGCCGGTGGT GCTGCAAGCC CGTGAGCCCG GCGGGGGTGA CGGGGAACGC
GGTGACGGCC CGCTCGAGCG CCTCGATGCC GTGCTGAATC AGCAGCTCGG TGCCGGCCGC
TGGCACGCTG CAGCCGATCT GCACCGGCTC GGACTGCCGG CGCCGCTGCG CAAGGTGCTG
CTCGATATCA CCTGA
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| Protein sequence | MSRAATAELP SIAADLVRWQ RQHGRHGLPW QASRDPYRVW LSEVMLQQTQ VATVLGYYER
FLQRFPDIAA LAAAPLDDVL ALWSGLGYYS RARNLHRCAQ VVVAEHGAAL PRRAEQLVEL
PGIGPSTAAA IASFCHGERV SIFDGNVKRV LARLLAFEGD LAQAGAAKVL WAQADRLVPT
DAADMPAYTQ GLMDLGATVC TPRDPQCPAC PLQRACRAHA AGSVLTYPIK SRKLKRSRRE
NWCLWLSLGD AVWLQQRPDT GIWAGLWAWP LFDDTDAVER LTAQLLAALG GHAERLQANR
LPGFVHVLTH LDWTLHPCRL HLPAPVVLQA REPGGGDGER GDGPLERLDA VLNQQLGAGR
WHAAADLHRL GLPAPLRKVL LDIT
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