Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_3488 |
Symbol | ppnK |
ID | 6160094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 3899449 |
End bp | 3900369 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641666260 |
Product | NAD(+)/NADH kinase family protein |
Protein accession | YP_001792507 |
Protein GI | 171060158 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0061] Predicted sugar kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0000826356 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCACAGG CGCTGTGGTG TAATTTCTGC ATGATCAGCC GCTTCCGTCA CGCCGCGCTC GTGGGCAAGT ACCAGGCCCA GGGCATGCGC CCGTTGCTGG AGGAAATCGC CCATGTGCTG ACCCGGCGCG GGCTCGAGGT CTCGGTCGAG GCGGCCACCG CGCAGAACAC CGGCATCACC GGCTACACGG CGCTGTCGGC CGACGAGCTG GGCCGGCACT GCGACATCGC GATCGTGGTC GGCGGCGACG GCACCATGCT CGGCATCGCC CGCCACCTGG CGCGTTTCGG CGTGCCGGTG GTCGGCATCA ACCAGGGCCG GCTGGGCTTC ATCACCGACG TGCCGGTGGC CGGCGTGGCG CGTGCGCTCA ATGCGGTGCT CAACGGCGAC TACGAAGAAG AAACCCGCGC CATGCTCGAA GGCCACGTGC TGCGCGGCGG CGAGCCGATC TACGACGCGG TGGCCATGAA CGACGTGGTG CTGCGCAGCG GCGCGACCGC GATGCTGGAG CTGCGGGTGG CGGTCGACGG CCAGTTCGTC GCCAACTTCC GCGCCGACGG CCTGATCCTG GCGTCCCCCA CGGGCTCGAC CGCCTACGCG CTGTCGGCCG GCGGGCCGAT CCTTCACCCG AGCGTGGCCG GCTGGCTGCT GGTGCCGATC GCCTCGCACA TGCTGTCGAA CCGGCCGATC GTGCTGCCGG ACTCGGGCGA GGTCACGATC GACATCGTCT CGGGGCGCGA GCCGAGCGTC AATTTCGACA TGCAATCCCT CGCCAGCCTG CTGCACGGCG ACCGCATCAG CGTGCGCCGC TCGGCGCACC GGGTGCGTTT CCTGCATCCG CCGGGCTGGA ACTATTACGC CACCCTGCGC CGCAAGCTGC ACTGGAACGA AGGCGCCTTG CCGCACGACG GCCACGGGTG A
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Protein sequence | MSQALWCNFC MISRFRHAAL VGKYQAQGMR PLLEEIAHVL TRRGLEVSVE AATAQNTGIT GYTALSADEL GRHCDIAIVV GGDGTMLGIA RHLARFGVPV VGINQGRLGF ITDVPVAGVA RALNAVLNGD YEEETRAMLE GHVLRGGEPI YDAVAMNDVV LRSGATAMLE LRVAVDGQFV ANFRADGLIL ASPTGSTAYA LSAGGPILHP SVAGWLLVPI ASHMLSNRPI VLPDSGEVTI DIVSGREPSV NFDMQSLASL LHGDRISVRR SAHRVRFLHP PGWNYYATLR RKLHWNEGAL PHDGHG
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