| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3462 |
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| Symbol | |
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| ID | 6159897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 3867076 |
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| End bp | 3867912 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641666237 |
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| Product | xanthine dehydrogenase accessory protein XdhC |
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| Protein accession | YP_001792485 |
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| Protein GI | 171060136 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1975] Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family |
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| TIGRFAM ID | [TIGR02964] xanthine dehydrogenase accessory protein XdhC |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.123979 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCACG CCGCGCTGTT GTCCACCGCT CGGCAATGGC TGGCGAGCGG CGTGCCGTGT
GTCGATGTCA GCGTGGTGGC GCATCGCGGC TCGGTGCCGC GCGAGAGCGG CACGCACATG
CTGGTGAGCG CCGGCGAGGT GGCCGGAACG ATCGGTGGTG GGCACCTGGA GCTGAAGGCG
ATCCAGGCCG CGCAGGAACT GCTGGCGGCA GGGTCGCAGC GGCTGGCCGC GCTGGCGCAC
GCGCCGCTGG ATCTGCATTT CCCGCTCGGC CCCGCGCTCG GCCAATGCTG CGGCGGCAGC
GTGACGCTGC GCCTGCAGCC GCTGACCGCC GACGCGCTCG CGGCCTGGAG CACCGCCACG
CCACGTTTCC ACCTGCAGCT CTACGGCGCC GGCCACGTCG GCCGGGCGAT CGTCGCGCTG
CTGGCCGGCA TCGACTGCCG GGTGCAGTGG ATCGACGAAC GCGAGGCCGA ATTCCCGCCG
CTGCGGCCCG GTGCGTTCGA GCCCGCACAC ATCGAACGCG TCTGCGTCGA GCCGGTCGAA
GCCGAGGTGG CCGTCGCGCC GCCGCTCTCG CATTACCTCG TGCTCACGCA CAGCCACGAC
CTCGACCTGC GCATCACCGA GGCGATCCTG CGGCGCGGCG ATTTCGCCTT CTGCGGCCTG
ATCGGCAGCC AGACCAAACG TGGGCGTTTC ATGCACCGCT TCGAGCAGCG CGGCATCGGC
GCCGACACGC TGGCGCGCCT GACCTGCCCG ATCGGTGTGC CGGGCATCGC CGGCAAGGAG
CCCGAAGTGA TCGCGATCGC GGTGGTGGCG CAGCTGCTGG CCGGCGGCAC GGGCTGA
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| Protein sequence | MSHAALLSTA RQWLASGVPC VDVSVVAHRG SVPRESGTHM LVSAGEVAGT IGGGHLELKA
IQAAQELLAA GSQRLAALAH APLDLHFPLG PALGQCCGGS VTLRLQPLTA DALAAWSTAT
PRFHLQLYGA GHVGRAIVAL LAGIDCRVQW IDEREAEFPP LRPGAFEPAH IERVCVEPVE
AEVAVAPPLS HYLVLTHSHD LDLRITEAIL RRGDFAFCGL IGSQTKRGRF MHRFEQRGIG
ADTLARLTCP IGVPGIAGKE PEVIAIAVVA QLLAGGTG
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