| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3453 |
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| Symbol | |
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| ID | 6159870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3854895 |
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| End bp | 3856046 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641666228 |
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| Product | basic membrane lipoprotein |
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| Protein accession | YP_001792476 |
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| Protein GI | 171060127 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.032757 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGATC CAACCAAGCG TTCCGTGATG AAGCTCACCG CGCTGGCATC GCTCGCGATG
TCGGCGGCCC TGGTGGGTTG CGGCAAGAAG GAAGAGCCTG CAGCGCCAGT CGCCGAGCCC
GCGGCTTCGG TCGCAGCCAA GCCCGAGCCG CTGAAGGTGG CGTTTGCCTA CGTGGGCCCG
GTGGGTGACG CGGGCTGGAC CTTCGCGCAC GACAACGCAC GCAAGGCCGC CGAGGCGGAG
TTCGGCGACA AGATCGTCAC CAGCTTCGTC GAGAACGTGC CCGAGTCGGC TGACGCGGAG
CGCGTGATGC GCGATCTGGT CGGCCAGGGC AACAAGCTGA TCTTCGGCAC CACCTTCGGC
TACATGGAGC CGATGCTGAA AGTTGCCGCC GACACGCCGG ACGTCAAGTT CGAGCACGCC
ACCGGCTACA AGACCGCCGC CAACCTGCGC ACCTACGACA GCCGCACCTA CGAAGGTGCC
TACATGGCCG GCGTGATCGC GGGCGGCATG ACCAAGAGCA ACACGCTGGG CGTGGTCGGC
TCGATCCCCA TCCCCGAGGT GATCCGCAAC ATCAACGCCT TCACGATGGG CGCGCAGAGC
GTCAATCCGA AGGTCAAGAC CAAGGTGGTC TGGATCAACA AGTGGTTCGA TCCCCCGAAG
GAAGGCGAGG GCGCGCAGAG CCTGATCTCC GGCGGCGCCG ACGTGCTGTT CCAGAACACC
GACTCCAGCG CGGTGCTGCA GAAGGCCGAC GAAAAGGGCA AGCTCGCCTT CGGCTGGGAC
TCGGACATGA GCAAGTACGC GCCCAACGCC CACCTGGCCT CGGCCATCAT CAACTGGGCG
CCGTATTACA AGAAGGCCAT CAAGGACGCG CTCGAAGGCA CCTGGACGAC CGGCGGCGTG
TGGTGGGGCG TGAAGGAAAA CGCGATCGAC ATCGTGTCGA TCTCCGACAA GGTGCCGGCC
GAACTGAAGG CCAAGGTCGA GACGGTCAAG GCCGGCCTGA TCGACGGCAG CTTCGTGATC
TGGAAGGGCC CGATCGTGGG TCAGGACGGC AAGGAAGTGC TGAAGAAGGA CGAGGTCGCC
GACGACAAGT TCCTGGGCGG CGTCAACTTC TACGTCAAGG GTGTCGAGGG CAAGGTGCCG
AGCGGCAAGT GA
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| Protein sequence | MTDPTKRSVM KLTALASLAM SAALVGCGKK EEPAAPVAEP AASVAAKPEP LKVAFAYVGP
VGDAGWTFAH DNARKAAEAE FGDKIVTSFV ENVPESADAE RVMRDLVGQG NKLIFGTTFG
YMEPMLKVAA DTPDVKFEHA TGYKTAANLR TYDSRTYEGA YMAGVIAGGM TKSNTLGVVG
SIPIPEVIRN INAFTMGAQS VNPKVKTKVV WINKWFDPPK EGEGAQSLIS GGADVLFQNT
DSSAVLQKAD EKGKLAFGWD SDMSKYAPNA HLASAIINWA PYYKKAIKDA LEGTWTTGGV
WWGVKENAID IVSISDKVPA ELKAKVETVK AGLIDGSFVI WKGPIVGQDG KEVLKKDEVA
DDKFLGGVNF YVKGVEGKVP SGK
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