| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3452 |
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| Symbol | rplM |
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| ID | 6159869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3854216 |
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| End bp | 3854644 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641666227 |
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| Product | 50S ribosomal protein L13 |
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| Protein accession | YP_001792475 |
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| Protein GI | 171060126 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0102] Ribosomal protein L13 |
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| TIGRFAM ID | [TIGR01066] ribosomal protein L13, bacterial type |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0225792 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATACCT TCAGTGCCAA GCCGGCAGAG GTCGTGCATG AGTGGTTTGT GATTGACGCA
ACGGACAAGG TTCTCGGACG GGTGGCCAGC GAAGTCGCCC TCCGCCTGCG CGGCAAGCAC
AAGGCCATCT ACACGCCTCA CGTGGATACC GGTGACTTTA TCGTTGTCGT CAACGCAGAA
AAACTCCGCG TGACCGGCAC CAAGTCGATC GACAAGAAGT ACTACCGTCA CTCGGGCTAC
CCGGGCGGTA TCTTCGAAAC CAACTTCCGT GACATGCAGG CCAAGCACCC CGGCCGTGCA
CTCCAGAAGG CCGTCAAGGG CATGCTGCCC AAGGGCCCGC TGGGTTACGC GATGATCAAG
AAGCTGAAGG TCTATGCCGG TGACACGCAC CCGCACGCCG CTCAGCAGCC GAAGACGCTG
GACATTTAA
|
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| Protein sequence | MNTFSAKPAE VVHEWFVIDA TDKVLGRVAS EVALRLRGKH KAIYTPHVDT GDFIVVVNAE
KLRVTGTKSI DKKYYRHSGY PGGIFETNFR DMQAKHPGRA LQKAVKGMLP KGPLGYAMIK
KLKVYAGDTH PHAAQQPKTL DI
|
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