| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3449 |
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| Symbol | |
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| ID | 6160282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3852414 |
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| End bp | 3852836 |
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| Gene Length | 423 bp |
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| Protein Length | 140 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641666224 |
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| Product | hypothetical protein |
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| Protein accession | YP_001792472 |
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| Protein GI | 171060123 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1664] Integral membrane protein CcmA involved in cell shape determination |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0234492 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTCGGTT CGAAGAAACA GCCTGCCATC CGCAGCCTCA TCGGCGAAGG CACTGTGGTG
CAGGGCACCT TGCGTTTCAG CGACGGCTTG CGCATCGACG GTGAAGTGCA GGGCGACGTC
GTCGCAAGTC CCGACGACAA GAGCATTCTC GTCATCAGCG AAAAAGCCAG GGTCATCGGT
ACGGTCAAGG CCGGTCATGT CATCATCAAC GGGACGGTGA TGGGGCCGGT CGAATCCACG
CTTCTGCTGG AATTGCAGCC CAAGGCCCGC ATCCAGGGCG ACGTGCGTTA CGAGTCGCTT
GAAATGCACC AGGGTGCCAC CATCGATGGT GCCTTGCAGC GACTGACCTC GGGTTCCGTT
GCCGCCGTTA TCGAAGACAA GCCGGCGCTG AAGCTGCTGG CCGCTGGCAA CGATATGAAA
TGA
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| Protein sequence | MFGSKKQPAI RSLIGEGTVV QGTLRFSDGL RIDGEVQGDV VASPDDKSIL VISEKARVIG
TVKAGHVIIN GTVMGPVEST LLLELQPKAR IQGDVRYESL EMHQGATIDG ALQRLTSGSV
AAVIEDKPAL KLLAAGNDMK
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