Gene Lcho_3447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3447 
SymbolanmK 
ID6160280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp3850796 
End bp3851893 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content69% 
IMG OID641666222 
Productanhydro-N-acetylmuramic acid kinase 
Protein accessionYP_001792470 
Protein GI171060121 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2377] Predicted molecular chaperone distantly related to HSP70-fold metalloproteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0189008 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGGCA CCTCGCTCGA CGGTGTCGAC GGCGTGCTGT GCCGATGGGA TGAGAGCGAT 
CGCTGGCACG GCGTGGTGGC CCATGTCCAC CAGCCTTTCG AAGCCGATTT CCAGGCGCAG 
CTGCTGGCGC TCCAGGCCAG CGGCCCTGAC GAACTGCACC GGGCGGCGCT GGCCGGCAAC 
GCACTGGCGC GCCGTTATGC CGAGGTCGTC GAACGGCTGC TGCAGCAAGC GGCCATGCCG 
GCCAGCCAGG TGCGTGCGGT CGGCGCGCAT GGCCAGACCG TGCGCCACCA ACCGCTGGCA 
TTCGACGGCG TGGGCTACAC GTCGCAGATC AACAACCCGG CCTTGCTGGC CGAACGCTGC 
GGCATCGACG TGATCGCGGA TTTCCGCAGC CGCGATCTGG CCGCGGGCGG CCAGGGTGCG 
CCGCTGGTGC CGACCTTCCA TCACGCCGTC TTCGGTGATC CGAACCGCAC CCTCGCGCTG 
GTGAACATCG GCGGCATCAG CAACCTGACG CTGTTGCAGG CCGGGCTGGC GCCGCGTGGC 
TGGGACGTCG GCCCGGGCAA TGTGCTGATG GACCTGTGGA CCATCCGCCA CCTCGGTCGC 
ACCTATGACG AGGGCGGCCG CTGGGCCGCC TCGGGCCAGG TCCTGCCGGG CCTGCTGAAC 
GCGCTGCTGG CAGAACCCTT TCTGGCGCTG TCGCCGCCCA AGAGCACCGG ACGGGATCTG 
TTCCATGCCA GCTGGCTCGA TGCCCATCTG GCACGCAGCG CACGATCGGC CGAACCAGCC 
GATGTTCAGG CCACGCTGTG CGCGTACACC GCGCAGTCCA TCGCCGGCGA TCTGCTGCGC 
CTGCAACTGC AGGTGGATGA ACTGCTGGTC TGCGGCGGCG GCGCATTGAA TGGCGAACTG 
ATGCGCCAAC TGCAGGCGGC CCTGGCTCGG ACACCCGTGC TGTCCAGCGA CGAACGAGGT 
CTGCCGCCCT TGCAGGTGGA AGCGGCTGCA TTTGCATGGC TGGCACATCA GCACCTGCGC 
CGACAAGCGG CCAGCGAGCC GGCGGTGACC GGCGCCCGGG GGCCGCGCAT CCTGGGCTGC 
TGCTACCCTG GGTATTGA
 
Protein sequence
MSGTSLDGVD GVLCRWDESD RWHGVVAHVH QPFEADFQAQ LLALQASGPD ELHRAALAGN 
ALARRYAEVV ERLLQQAAMP ASQVRAVGAH GQTVRHQPLA FDGVGYTSQI NNPALLAERC 
GIDVIADFRS RDLAAGGQGA PLVPTFHHAV FGDPNRTLAL VNIGGISNLT LLQAGLAPRG 
WDVGPGNVLM DLWTIRHLGR TYDEGGRWAA SGQVLPGLLN ALLAEPFLAL SPPKSTGRDL 
FHASWLDAHL ARSARSAEPA DVQATLCAYT AQSIAGDLLR LQLQVDELLV CGGGALNGEL 
MRQLQAALAR TPVLSSDERG LPPLQVEAAA FAWLAHQHLR RQAASEPAVT GARGPRILGC 
CYPGY